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SCNpilot_expt_500_bf_scaffold_4169

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4169_1
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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2..394
DNA (393bp) protein (131aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. S17.;"
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
prolyl-tRNA synthetase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289AE91
SCNpilot_expt_500_bf_scaffold_4169_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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394..819
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C1388
Uncharacterized protein {ECO:0000313|EMBL:GAO39256.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
phenylacetic acid degradation-like protein
SCNpilot_expt_500_bf_scaffold_4169_3
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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841..2364
DNA (1524bp) protein (508aa)
fumarate hydratase FumA/FumB; K01676 fumarate hydratase, class I [EC:4.2.1.2] rbh
UPI0003CFA91D related cluster n=1 Tax=unknown RepID=UPI0003CFA91D rbh
Fumarate hydratase {ECO:0000313|EMBL:ESZ87869.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
SCNpilot_expt_500_bf_scaffold_4169_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2471..2827
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002DE8C1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70158.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_500_bf_scaffold_4169_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2894..3721
DNA (828bp) protein (276aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRD9_PARL1 rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEG50984.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCNpilot_expt_500_bf_scaffold_4169_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3739..4416
DNA (678bp) protein (226aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
ribose 5-phosphate isomerase; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003732536
SCNpilot_expt_500_bf_scaffold_4169_7
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4488..6473
DNA (1986bp) protein (662aa)
Transketolase {ECO:0000313|EMBL:EZP57340.1}; EC=2.2.1.1 {ECO:0000313|EMBL:EZP57340.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
transketolase; K00615 transketolase [EC:2.2.1.1] rbh
transketolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B754B0 rbh
SCNpilot_expt_500_bf_scaffold_4169_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6541..7650
DNA (1110bp) protein (370aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
transaldolase/glucose-6-phosphate isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
transaldolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD5C0 rbh
SCNpilot_expt_500_bf_scaffold_4169_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7716..8702
DNA (987bp) protein (329aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] rbh
6-phosphogluconate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI000377D2C0 rbh
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28995.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_500_bf_scaffold_4169_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8702..9496
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037B9E63 rbh
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28994.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cof family hydrolase; K07024
SCNpilot_expt_500_bf_scaffold_4169_11
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9493..10239
DNA (747bp) protein (249aa)
haloacid dehalogenase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B882 rbh
Haloacid dehalogenase {ECO:0000313|EMBL:ETI59052.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
putative hydrolase; K07024 rbh
SCNpilot_expt_500_bf_scaffold_4169_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10246..11034)
DNA (789bp) protein (263aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
inositol monophosphatase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3733D rbh
Inositol monophosphatase family protein {ECO:0000313|EMBL:EZP48813.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_expt_500_bf_scaffold_4169_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11027..11494)
DNA (468bp) protein (156aa)
modulator protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0B8
Modulator of DNA gyrase family protein {ECO:0000313|EMBL:EZP48814.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
pmbA; putative Zn-dependent protease PmbA; K03592 PmbA protein
Displaying 13 items

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