ggKbase home page

SCNpilot_expt_500_bf_scaffold_12631

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12631_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..789)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000362EB35
Sphingomonas taxi strain 30a NODE_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26464.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12631_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(874..3123)
DNA (2250bp) protein (750aa)
phosphoenolpyruvate-protein phosphotransferase PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
peptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3C214 rbh
PtsP protein {ECO:0000313|EMBL:GAN11995.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_expt_500_bf_scaffold_12631_3
unknown

Not on your lists

comp(3283..3516)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4E614
SCNpilot_expt_500_bf_scaffold_12631_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3651..4844)
DNA (1194bp) protein (398aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123, ECO:0000313|EMBL:AJP73835.1};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1]
acetyl-CoA synthetase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A45F4
SCNpilot_expt_500_bf_scaffold_12631_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4816..5505)
DNA (690bp) protein (230aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Acetyl-coenzyme A synthetase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SLF4_9SPHN
acetyl-coenzyme A synthetase
SCNpilot_expt_500_bf_scaffold_12631_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5614..6630
DNA (1017bp) protein (339aa)
dihydroflavonol-4-reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAB98 rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KHS48320.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
dihydroflavonol-4-reductase rbh
Displaying 6 items

View Taxonomy