name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_2017_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..534)
|
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000372972A
NADH (or F420H2) dehydrogenase subunit C
|
|
SCNpilot_expt_500_bf_scaffold_2017_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(531..1064)
|
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
NADH dehydrogenase I subunit B (EC:1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit B n=1 Tax=Sphingomonas melonis RepID=UPI00036237F4
|
|
SCNpilot_expt_500_bf_scaffold_2017_3
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1061..1435)
|
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
nuoA; NADH-quinone oxidoreductase subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003791044
|
|
SCNpilot_expt_500_bf_scaffold_2017_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1654..2466)
|
inositol monophosphatase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003797631
rbh
Inositol monophosphatase family protein {ECO:0000313|EMBL:EZP57539.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
inositol-phosphate phosphatase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2017_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2515..3078)
|
elongation factor P n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B767D0
rbh
elongation factor P
rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_expt_500_bf_scaffold_2017_6
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3175..3858)
|
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
rbh
Thiamine-phosphate synthase n=1 Tax=Sphingomonas sp. S17 RepID=F3WUP6_9SPHN
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2017_7
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3906..4265)
|
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WXL7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO13548.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4277..4939)
|
DSBA oxidoreductase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B3E713
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AGH49885.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_expt_500_bf_scaffold_2017_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4936..5382)
|
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3EBE5
Uncharacterized protein {ECO:0000313|EMBL:AJP71512.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5354..5977)
|
YjeF-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNF5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJP71511.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_11
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6019..7326
|
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
tRNA (uracil-5-)-methyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B756AD
rbh
tRNA (uracil-5-)-methyltransferase Gid
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2017_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7331..7789)
|
histidine kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B39F5F
Histidine kinase {ECO:0000313|EMBL:AJP71506.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
signal transduction protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7858..8502)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA7BA
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30006.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|
|
SCNpilot_expt_500_bf_scaffold_2017_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8572..10461
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630ACE
rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP71504.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_15
unknown
|
Not on your lists |
comp(10380..10631)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2017_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10660..11019
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037AE87A
Uncharacterized protein {ECO:0000313|EMBL:AJP71503.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11010..11744
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037CE69B
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30004.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
tight adherence protein TadE
|
|
SCNpilot_expt_500_bf_scaffold_2017_18
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11799..13160)
|
pyruvate dehydrogenase subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase subunit beta {ECO:0000313|EMBL:AGH50339.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AGH50339.1};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
pyruvate dehydrogenase subunit beta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3E933
|
|
SCNpilot_expt_500_bf_scaffold_2017_19
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13162..14217)
|
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
pyruvate dehydrogenase (lipoamide); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F54E6
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2017_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14812..15633
|
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7A84A
MFS transporter {ECO:0000313|EMBL:AIT05450.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
major facilitator superfamily protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15630..16550
|
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
Cysteine synthase A n=1 Tax=Sphingomonas sp. S17 RepID=F3WVS2_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_2017_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16615..17778
|
cell wall hydrolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B67F4F
rbh
SleB-like protein {ECO:0000313|EMBL:AIT07940.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SleB-like protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2017_23
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17863..18474
|
Putative acyltransferase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CY98_CAUCE
Putative acyltransferase {ECO:0000313|EMBL:ENZ81255.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
N-acetyltransferase GCN5
|
|
SCNpilot_expt_500_bf_scaffold_2017_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18572..19441)
|
Methyltransferase domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSH0_9SPHN
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13136.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
methlytransferase, UbiE/COQ5 family protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19590..20663)
|
recombinase RecA n=1 Tax=Sphingomonas melonis RepID=UPI00036CAF77
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
recombination protein RecA; K03553 recombination protein RecA
|
|
SCNpilot_expt_500_bf_scaffold_2017_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20767..21588)
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Sphingomonas elodea RepID=UPI00026305E3
|
|
SCNpilot_expt_500_bf_scaffold_2017_27
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21594..23174)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000375A9A3
rbh
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EZP49000.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
TPR repeat-containing protein
|
|
SCNpilot_expt_500_bf_scaffold_2017_28
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23149..24810)
|
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
rbh
electron transfer flavoprotein-ubiquinone oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI00036FF9A5
rbh
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:EZP48999.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
|
|
SCNpilot_expt_500_bf_scaffold_2017_29
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24919..25680
|
uracil-DNA glycosylase superfamily protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
uracil-DNA glycosylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B68E8F
Uracil-DNA glycosylase {ECO:0000313|EMBL:KHA65485.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
|
|
SCNpilot_expt_500_bf_scaffold_2017_30
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25677..27512
|
lytic transglycosylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6E5EE
rbh
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EZP48997.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
lytic transglycosylase subunit
|