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SCNpilot_expt_500_bf_scaffold_2544_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 2012..2527

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS02_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 165.0
  • Bit_score: 225
  • Evalue 3.20e-56
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 165.0
  • Bit_score: 225
  • Evalue 1.00e-56
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 152.0
  • Bit_score: 227
  • Evalue 1.50e-56

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Taxonomy

BJP_08E140C01_10KDA_Sphingopyxis_64_55 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
TTGACCTCGAAGCGGATCACTCGCTACCCGCCCGATTATTACAAGAACCCCGAGAATAGCATCGGCTATCTCACGCGGATCGTATTCCGTAACTTCTCGCGATTGCTGGAACGCCATACGTTGCAGCACGATATTTCCGCCGGCCAATGGCGTTTCCTGCGGCAATTGTGGATCGAGGACGGGATCACGCAGCGCGAGCTGAGCGAGCGCGTCGGGATGCGCGAGCCGACCACGGTCGTCGCGCTCAAGGGGCTGGAGGCGGCCAAGCTGATCCGGCGCGAGAAGAGCGAGATCGATCGCCGCAAGATCCACATCTATCTCACGCCCTTCGCCAAATCGCTGGAGGCGAAGCTCGCCCCGCTCAACGCCGAGGTGCACGCCGCGGCGACCGCCGGCATGTCCGACGAGGAAGTGGAGACGCTTCGGGTCCTGCTGCGCCGCGTGATCGGCAACCTCACCGCCGAGGCCCGCCGCATCCCGGCCGAAATTCAGAGCGAACCCGACGAGGGGGCTTGA
PROTEIN sequence
Length: 172
LTSKRITRYPPDYYKNPENSIGYLTRIVFRNFSRLLERHTLQHDISAGQWRFLRQLWIEDGITQRELSERVGMREPTTVVALKGLEAAKLIRREKSEIDRRKIHIYLTPFAKSLEAKLAPLNAEVHAAATAGMSDEEVETLRVLLRRVIGNLTAEARRIPAEIQSEPDEGA*