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SCNpilot_expt_500_bf_scaffold_3958_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(7889..8398)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E927EE similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 167.0
  • Bit_score: 229
  • Evalue 2.20e-57
nuclear export factor GLE1 similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 169.0
  • Bit_score: 137
  • Evalue 4.60e-30
Nuclear export factor GLE1 {ECO:0000313|EMBL:ABD87976.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 169.0
  • Bit_score: 137
  • Evalue 2.10e-29

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCGTATCGTCGCGATGCTCGCCGCTCTGTCCGTGCTGTCCAGCGCGGCCGACGCCCATATCGTCTTCGCCGAGCCGGAGGCGCCGGCGGGCGGCTATCATGCCGGCTTCCTGCGCGTCACCCACGGCTGCGGGGATTCGCCGACGCGCTCGATCCGGGTGGAGATACCGGAGTCCGTGGTCTCCGCGCGGCCGCAGCCCAAGCCGGGCTGGACGCTCGCGATCGAGCGCCAGCCGCTGAAAACGCCGGTCAAGGGAGAAGGTGGCGCGCTCATCACCGAGCGCGTCTCCGCGATCACCTGGACGGGCGATCTGCCCGCAGATCAGTTTGACCAGTTCGGCGTGATGATGAAGCTGCCGGCGACGGCGGGCGCGCTCTATTTCCGCACGGTGCAGCGCTGCGCGACGGGGAGCAACGACTGGGTCAACATCCCCGCCTCGTCCGCCGCATGGCATAGGACGGCGATGCCCGCGCCGATGCTGTTGCTGCGCGCCGCGCCGGCGCATTGA
PROTEIN sequence
Length: 170
MRIVAMLAALSVLSSAADAHIVFAEPEAPAGGYHAGFLRVTHGCGDSPTRSIRVEIPESVVSARPQPKPGWTLAIERQPLKTPVKGEGGALITERVSAITWTGDLPADQFDQFGVMMKLPATAGALYFRTVQRCATGSNDWVNIPASSAAWHRTAMPAPMLLLRAAPAH*