ggKbase home page

SCNpilot_expt_500_bf_scaffold_4116_11

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(9745..10494)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, plug n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEI6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 236.0
  • Bit_score: 240
  • Evalue 2.40e-60
Uncharacterized protein {ECO:0000313|EMBL:AJP74428.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 234.0
  • Bit_score: 248
  • Evalue 1.20e-62
TonB-dependent receptor, plug similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 236.0
  • Bit_score: 240
  • Evalue 7.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCAGAAGACGCTGAACTTCAATCCGGCGACCGACGTCTTTTCGCCCAACAATGCCGAAACCTCGTCGGAGAAGGTGACCTGGCGCGTCGGGGTCGATTATGATCTGGACAACCGCACGCTTCTCTATGCCTCGGTCGCGACGGGTTACAAGGGCGGCGGCTTCAACGGCGGCTGTCTTGCCACAGCGCCCAACTGCCCCAATCCGCGCACGCGCACCTACTTGTTCTACGCGCCGGAAACGCTGACCGCATATGAAGTGGGTCTGAAGACCCGTTTCGCCGACAACAAGGTACGGCTGAACGCCAGCGCTTTCTACTATGATTACGACAACCTTCAGGTCTCATCGATCATCAATGACAATGGCGCGCCGCGTCAGTTCACCACCAATGCGGCCCGCGCGCGGGTGAAGGGTGTCGAGTTGGAGACGACGATCACCCCATCGCCACGCAACCGCGTCGATGCCTCCTTCACGTGGCTCGATGCCGAATATGCGAGCTACTTCCCGCTCGGCGTGGGCAACGCGCCGGACTTCAAGGGACGCCCGCTCGACCGCGCGCCGCGCGTCGTCGCCACCGCCGGATATAGCTACACGCTGCCGCTCGCCAATGGCGGCAGCCTGATGGCGTCGGTACGCTCACGCCTCAGCAGCGAATATTTCATGACGGCGCAGGCGGTCGGTGCGCAATATCGTCAGCCCGGCTACACCCGCACCGATCTGACGTTGTTACGTCCAAGGCTTCTGGCGTAA
PROTEIN sequence
Length: 250
MQKTLNFNPATDVFSPNNAETSSEKVTWRVGVDYDLDNRTLLYASVATGYKGGGFNGGCLATAPNCPNPRTRTYLFYAPETLTAYEVGLKTRFADNKVRLNASAFYYDYDNLQVSSIINDNGAPRQFTTNAARARVKGVELETTITPSPRNRVDASFTWLDAEYASYFPLGVGNAPDFKGRPLDRAPRVVATAGYSYTLPLANGGSLMASVRSRLSSEYFMTAQAVGAQYRQPGYTRTDLTLLRPRLLA*