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SCNpilot_expt_500_bf_scaffold_5113_10

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(7378..8037)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000313|EMBL:EZP54652.1}; EC=5.4.99.- {ECO:0000313|EMBL:EZP54652.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 209.0
  • Bit_score: 327
  • Evalue 1.80e-86
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 219.0
  • Bit_score: 302
  • Evalue 1.40e-79
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036140D4 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 209.0
  • Bit_score: 356
  • Evalue 2.60e-95
  • rbh

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCTGGGCGACCGGGTGCTCTTCCTCGACGGCGAGGCGTTGGTGATCGACAAGCCTGCGGGCCTGCCGGTCGATCGGCCGCGCGACGGCGCGATCAGCCTGGAGAACCATCTCGCCGCCTTGACCTTCGGCTTCCGCCGCTGGCCCCAGCCGGTGCACCGGCTCGACCGCGACACCAGCGGCTGTTTGCTTCTGTCGCGCAATCCCAAGGCGCACGCGCGATTCCAGCAGGCGTTCGAGGCGGGGGCGGTAATGAAGCGCTACCTCGCGGTGCTCGACGGCGTGCCGGCAGGCGAGGCGGGCGAGATCGACCTGCCGCTCGCCAAGGTCTCCACCCGTGAGCGCGGCTGGTGGATGACGGGCGATGCGAAAGGCAAAGCGGCGCGCACCGCGTGGCGGCTGCTCGATGCGCGTGACGGGCGCGCGCTGGTCGAGTTTCGCCCGGCGACCGGCCGCACCCACCAGATCCGCGTCCATGCGCTCGAAGGGCTGGGCCATGCCGTCACCGGCGACCCGACCTATGGCGCCACGCATCCGGCGGGGATGATGCTTCACGCCGCCGAACTGGTCGTGCCGCGCCCCGGCAAGGAGGATATCGCCGCGACCGCGCCTTGGCCGGAGCGGTTCACCAGGGCCGGGTTCGATGATCCGGGTGCCTGA
PROTEIN sequence
Length: 220
MLGDRVLFLDGEALVIDKPAGLPVDRPRDGAISLENHLAALTFGFRRWPQPVHRLDRDTSGCLLLSRNPKAHARFQQAFEAGAVMKRYLAVLDGVPAGEAGEIDLPLAKVSTRERGWWMTGDAKGKAARTAWRLLDARDGRALVEFRPATGRTHQIRVHALEGLGHAVTGDPTYGATHPAGMMLHAAELVVPRPGKEDIAATAPWPERFTRAGFDDPGA*