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SCNpilot_expt_500_bf_scaffold_5237_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 10186..10884

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 233.0
  • Bit_score: 421
  • Evalue 5.80e-115
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-) similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 236.0
  • Bit_score: 385
  • Evalue 1.30e-104
thiouridylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8FD similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 233.0
  • Bit_score: 411
  • Evalue 5.60e-112

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGATCAGGCGGATTTCCAGCTCGGCGAGGGCCTTTCGGGCAAGCGCATCGTCGTCGCCATGTCGGGCGGGGTCGACAGCTCGGTGGTGGCCGCGCTCGCCCATGCGACCGGCGCGGAGACGATCGGCGTGACGCTCCAGCTATACGACCATGGCGAAGCGGTGGGCCGCACCGGCTCGTGCTGCGCCGGGCGCGACATCCGCGACGCGCGCGCGGTGTGCGACCGGCTGGGCATCGCGCATTACGTGTTCGATCATGAATCGCGCTTCCGCGAGACGGTGGTGGACCGGTTCGCCGACGAATATCTCGCCGGGCGCACCCCGATCCCCTGCGTCCAGTGCAACATGGGGCCGAAGTTCACCGACCTGTTCGCGCTGGCCCGCGATCTCGGCGCGGATTGCCTCGCGACCGGCCATTACGTTCGTCGCGTTATCGGCACGGAAGGCCCCGAACTGCATCGCGGCCTCGATCCGGCGCGCGACCAGAGCTATTTCCTGTTCGCGACGACGCGCGCGCAGCTCGATTTCCTGCGCTTCCCGCTCGGTGCGCTACCCAAGGCGCGGGTGCGCGAGATCGCCGCCGGACTCGGCCTCGGCGTCGCGGCCAAGCCCGACAGTCAGGACATCTGCTTCGTCCCCGATCGCGATTATGCCGGCCTCGTCCGCAAGCTCAGGCCCGAGGCGGACACGGCGGGCGAG
PROTEIN sequence
Length: 233
MDQADFQLGEGLSGKRIVVAMSGGVDSSVVAALAHATGAETIGVTLQLYDHGEAVGRTGSCCAGRDIRDARAVCDRLGIAHYVFDHESRFRETVVDRFADEYLAGRTPIPCVQCNMGPKFTDLFALARDLGADCLATGHYVRRVIGTEGPELHRGLDPARDQSYFLFATTRAQLDFLRFPLGALPKARVREIAAGLGLGVAAKPDSQDICFVPDRDYAGLVRKLRPEADTAGE