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SCNpilot_expt_500_bf_scaffold_5905_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(662..2332)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 553.0
  • Bit_score: 468
  • Evalue 1.70e-128
Cache sensor signal transduction histidine kinase (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 562.0
  • Bit_score: 443
  • Evalue 1.30e-121
  • rbh
Cache sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFD1_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 562.0
  • Bit_score: 443
  • Evalue 4.10e-121
  • rbh

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGATCGATATCGCGCGAAGCGATACCTCCATCAGCTCGATCTATTTCAACTCGCATGACAGCTACAATCTGATTTATCCCTATGTGGACGTCATCCGACAGTATCCCAGGCGGATGGCCATCCCGACGTACAATTTCTACTACGAGGCTGATGCCGCCCACAATCCGCGTCGCGTACCGGTCTGGACAGATGCCTATGTCGATCCTGCCGGCCATGGCTGGATGGTATCCTCGATCGTGCCGGTCTGGGAGGGCAACTCACTTGAAGGCGTAGCCGGCATCGATCTGACACTCGATACCGTCGTCAACCGCCTTCTGGACCTTCATCTCCCCTGGGATGCCTACGCGCTCCTCGTCGATCGCAAAGGGGGGATCATCGCCCTGCCGCCAGCTGGCGAACGGGATTTTGGCCTCAAGGAACTGACCGATCATCATTATGCGCAGGCGATCCGGTCAGACACCTTCAAGCCGGATCAGTTCAACCTCCGCAAGCGTGCCGACATGAAAACCCTCGTGGCTGCCATGGGGAGATCGCCGGATGGGGTTACGGAGTTCACTTTCGCCGGCGCTCCGCATCTCGCGAGCTTTGCTCGGATTGCAGGTCCCGACTGGCGGCTTGTCGTCATAGCGCCGACTGCCCGCATTCACGCCAAGGCAGACGCGCTGCGTCAGAAGTTCGAGACCGTGGGCCTCGTCATGCTCGCGGCGCTCTTTTTCTTCTATGTGCTCTTCTTCATGTTCCTCAACCGCCGCGCGAGCCGGATGAGCGCCAGGATCGCCGCGCCGCTTGACCAGATTTCCGCGCTCTTTCAGAGGATCGGGACCGGAGACTATCGGCAGACATTCGAAGGGTCCGAGGTCGAGGAGCTCGATACCCTCGGGCATCGGCTTGTCGAGACCGGCAAGCGACTGGGCGCTGCGAACGAAAGCATCCGGACGCAGCAGAGGACGGTGAGCCTTGCCCTGATGCGGCAACGTGCTGCGAATGAGGAGCAGGTGCGGTTCGTGAGGATCATGTCTCATGAACTTCGTACCCCGCTGTCGGTGATCGATAGCGGGGCGCAGATCATCGATCGGAAGGCGGAAGCGATGAGCGCGGCGGATCTGCGCAAGCGTGCCGGAAGGCTGCGCAGTTCGGTGCAGACCATTTCGAATCTGTTGAGTCGTCTTGTCGATAACGCCGCCGTGGACATTGCATCATCTCCGCGTGACCAGCGAGGGGTCATCGATGCGAACTTGCTCGTCCGTGAGGTGGCCGCCTCGCATATTCCGCAGGAGCGCCTCGGCCTGGAACTCGCAACCGAGCAGCTTTTCATCTCCGACGGCCCTGCTTTCCCGATCGCGTTGAGTGCGGTCCTCGACAACTGCGTGCGCTATTCGATAGAAGATGGCCGGATCACCATCGGCGTCCATCCTGATGGCGAGGCGGTGCATGTGACGGTGGTCGACAAAGGCCCGGGGATCCCCGGCGCCGAGTTGGCCTTCATCGGGCAGCGCTTTTACCGGGGCAGGAATTCGACCGGTATCGAGGGGACCGGCATGGGCCTTTACATCGCGCGTAAGCTGATGATGTCGGCCGGAGGCGATCTCACGCTGGCGTCGGACGAGACAGGGACAACCGTGCGTATCACACTCCCGATTGCTTTGCGCGAAGGAGACTTGGCCGCATGA
PROTEIN sequence
Length: 557
MIDIARSDTSISSIYFNSHDSYNLIYPYVDVIRQYPRRMAIPTYNFYYEADAAHNPRRVPVWTDAYVDPAGHGWMVSSIVPVWEGNSLEGVAGIDLTLDTVVNRLLDLHLPWDAYALLVDRKGGIIALPPAGERDFGLKELTDHHYAQAIRSDTFKPDQFNLRKRADMKTLVAAMGRSPDGVTEFTFAGAPHLASFARIAGPDWRLVVIAPTARIHAKADALRQKFETVGLVMLAALFFFYVLFFMFLNRRASRMSARIAAPLDQISALFQRIGTGDYRQTFEGSEVEELDTLGHRLVETGKRLGAANESIRTQQRTVSLALMRQRAANEEQVRFVRIMSHELRTPLSVIDSGAQIIDRKAEAMSAADLRKRAGRLRSSVQTISNLLSRLVDNAAVDIASSPRDQRGVIDANLLVREVAASHIPQERLGLELATEQLFISDGPAFPIALSAVLDNCVRYSIEDGRITIGVHPDGEAVHVTVVDKGPGIPGAELAFIGQRFYRGRNSTGIEGTGMGLYIARKLMMSAGGDLTLASDETGTTVRITLPIALREGDLAA*