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SCNpilot_expt_500_bf_scaffold_5905_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 2825..4660

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 587.0
  • Bit_score: 270
  • Evalue 4.30e-69
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00035C78AE similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 609.0
  • Bit_score: 289
  • Evalue 8.40e-75
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 478.0
  • Bit_score: 184
  • Evalue 9.10e-44

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1836
ATGGCGCGACTGAAAACCAATTTTCCTTACCTGGAACAAAATGCCCTCGATGCCTTCGCGCTTCTAGGGACTCCGCTTTACATCTACAGTTTCGAAACACAAAGAATCTGCTGGGCCAATCACCTGGCCCTGGCCTTCTGGGATTCTCCTTCTGCAAAGGAGCTCCTGAACCGCCCCATGACGCCCTATAGCGATTCAACGCGCATCCGCCTCAGCGATTATCAAGACGCCTTCGCCAGGGGCGAAATACGGCACGAGAGCTGGACCTTTTATCCAAAAGGAAAAGCGACCTCGGCCATGTGCCGCTGCAGCGGCGTCAGCCTCCTTGGCCATGGTCACGCCATGCTGGTCGAGATTGAAAACACGCTCGCCACCGAGTTGCCCTTCGCTGACCTGCGCTCGCTCGAGGCACTGCGCCACACCCCGCTCATGATCTCCCTCTTCTCCGAGGAGGGCTTTCTCCTCACCCAGAACCCCGCCGCAACAGCGTGTTTTGGCGGACTCCTCCACGGGCTCGGGGAAAGGGCGGACGCCTTTGGAAAGCTCTTCGCCGAGCAAGATGCTGCGCGATCGATTCTCAAGGAGGCGCGCCAGGTCGGGGCCGTGCGCACGACAGCGGTGATGGCACTTGAAGGTTCGCCCGTTCACTCTCTTCAGGTCTCGCTCGTCAGCGACCCGGTTACCGGCCAGAACGCCGTCCTCGTCTCGCAGGAAGATATCTCGCATCTCCTCGAGATGTCCCGCCAGCTTGCCGCGAGCGAATATGCCCTCGACGCCGTTCTAAACCTCAATCTTACCCCCGCTCTCGTCCTCTCTGAAGCCGACGGCCGCGTGCTCAAAGCCAACGTGTCCGCCAGCCGGCTTCTTGGTGAGGGCCGTGAGGAGCCTGACGGCCCCGAAGCGATCTTCGAAAAGACGCAGGACTATGCACGGCTCCGCTCGATGGTGCTCGCGAGCGGAACCGGGGCGCTTCCGACCCGAGTCAGGCTCCATGACGGCCGCACCTCTTGGTTCCATATTTCCGGGGCCAGGATCCGCTACGAGCGCAATGACGCGATCGTTATCCTGATGACCGACGTCGATGACGTGTACCAGACAACCGCTGATCTCGAGGCCGCCCTATCGAGCGAGCGGCGTGTCAGCGATATGCAGCGGCGCTTCCTCGCCATCGCGTCGCACGAATTCCGCACACCCCTCGCGATCATCGACAGCGCCGCACAGCGGCTTGAGCGTCGCGCGGAAGAGAAGACGCCCGAGCAGATCCGGGCGCGCGCCGCGCGCATCCGCAGCACCATCAAGAACCTGCTTCATCTTCTGGACAATACGGTCGAGCGTGTCCGTCTCGACCAGGGGGAGATGGGCTATGCACCCGAGCATGGCGATCTCGCGGCCGTCATTCGCCGAGTGATTGACAGCTTCTCGGAGAAGGATCCGCAGATCGCCTTCCGCTTGGATGTCGCCGACCTGCCGCCCGTCGCGTTCGATACGATGCTCATGGAACAGCTGATGAGGAACGTCATCTCCAACGCGATCAAATATTCCGAGGGGCAAACAAAGATCGAGATAGCCATCACCGCGCCAGCGGACTCGGTGCAGATCGAAATCCGCGATCACGGTATCGGCATCCCTGTTCCGGAGCGCGACAGGGTGTTCAAGGCCTATGCGCGTGCGTCAAATGCCGAAGGGATCGAGGGAACCGGTCTTGGTCTCTCGATCGTCCATCATATCGTCGACCTCCATGGCGGGACGGTTGGAATCGTTAACACCGAAGGTAAAGGCACCACGATCAGGATCGACCTTCCTCAGCGCCGCGAGACCGACCTCGAAGGACGCTAG
PROTEIN sequence
Length: 612
MARLKTNFPYLEQNALDAFALLGTPLYIYSFETQRICWANHLALAFWDSPSAKELLNRPMTPYSDSTRIRLSDYQDAFARGEIRHESWTFYPKGKATSAMCRCSGVSLLGHGHAMLVEIENTLATELPFADLRSLEALRHTPLMISLFSEEGFLLTQNPAATACFGGLLHGLGERADAFGKLFAEQDAARSILKEARQVGAVRTTAVMALEGSPVHSLQVSLVSDPVTGQNAVLVSQEDISHLLEMSRQLAASEYALDAVLNLNLTPALVLSEADGRVLKANVSASRLLGEGREEPDGPEAIFEKTQDYARLRSMVLASGTGALPTRVRLHDGRTSWFHISGARIRYERNDAIVILMTDVDDVYQTTADLEAALSSERRVSDMQRRFLAIASHEFRTPLAIIDSAAQRLERRAEEKTPEQIRARAARIRSTIKNLLHLLDNTVERVRLDQGEMGYAPEHGDLAAVIRRVIDSFSEKDPQIAFRLDVADLPPVAFDTMLMEQLMRNVISNAIKYSEGQTKIEIAITAPADSVQIEIRDHGIGIPVPERDRVFKAYARASNAEGIEGTGLGLSIVHHIVDLHGGTVGIVNTEGKGTTIRIDLPQRRETDLEGR*