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SCNpilot_expt_500_bf_scaffold_1398

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1398_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JL99_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EIK53239.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
transcriptional regulator, AsnC family
SCNpilot_expt_500_bf_scaffold_1398_2
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

461..1054
DNA (594bp) protein (198aa)
Lysine exporter protein (Lyse/ygga) n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SUS0_ALCXX
Lysine exporter protein (Lyse/ygga) {ECO:0000313|EMBL:EGP48180.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
Putative threonine efflux protein
SCNpilot_expt_500_bf_scaffold_1398_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1514..2449)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV83_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB75142.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2511..3131
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV35_RHITR rbh
transcriptional regulator, TetR family rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGB75143.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3124..3702)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYC5_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB75144.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3955..4305)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWM0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN85131.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1398_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4326..4922)
DNA (597bp) protein (199aa)
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-] rbh
Putative ThiJ/PfpI family protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UTX9_9RHIZ rbh
Putative ThiJ/PfpI family protein {ECO:0000313|EMBL:ENN85130.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_1398_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5017..5409)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYH2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75145.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..6998)
DNA (1509bp) protein (503aa)
Acetaldehyde dehydrogenase 2 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4B4_9RHIZ rbh
Acetaldehyde dehydrogenase 2 {ECO:0000313|EMBL:ENN85128.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
acetaldehyde dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_1398_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7155..8105)
DNA (951bp) protein (317aa)
Transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV88_RHITR rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGB75147.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8499..9392
DNA (894bp) protein (298aa)
Putative PAP2 family phosphatase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV38_RHITR rbh
putative PAP2 family phosphatase rbh
Putative PAP2 family phosphatase {ECO:0000313|EMBL:AGB75148.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9564..9818
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYD0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75149.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10047..10466
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYH7_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75150.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10424..12088
DNA (1665bp) protein (555aa)
Saccharopine dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWR4_RHITR rbh
saccharopine dehydrogenase rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:AGB75151.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_15
bacterium YEK0313, Bacteria

Not on your lists

comp(12165..12824)
DNA (660bp) protein (220aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CW77_RHILU
SCNpilot_expt_500_bf_scaffold_1398_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12787..13800)
DNA (1014bp) protein (338aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium
2-isopropylmalate synthase n=2 Tax=Rhodospirillum rubrum RepID=Q2RUD3_RHORT
SCNpilot_expt_500_bf_scaffold_1398_17
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14361..14855
DNA (495bp) protein (165aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PZT5_9RHIZ
DNA-binding domain-containing protein, AraC-type
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:CDI10605.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_expt_500_bf_scaffold_1398_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14870..15427)
DNA (558bp) protein (186aa)
Putative acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV93_RHITR rbh
putative acetyltransferase rbh
Putative acetyltransferase {ECO:0000313|EMBL:AGB75152.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1398_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15430..15735)
DNA (306bp) protein (102aa)
Beta-lactamase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV42_RHITR
beta-lactamase family protein
Beta-lactamase family protein {ECO:0000313|EMBL:AGB75153.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 19 items

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