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SCNpilot_expt_500_bf_scaffold_1501

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1501_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(231..473)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2T6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87411.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_1501_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686..997
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JA92_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK79688.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_500_bf_scaffold_1501_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1297..1662)
DNA (366bp) protein (122aa)
Two-component response regulator protein n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JA91_AGRRK
response regulator receiver protein
Two-component response regulator protein {ECO:0000313|EMBL:ACM27706.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_500_bf_scaffold_1501_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2256..2765
DNA (510bp) protein (170aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLX7_RHITR rbh
N-formylglutamate amidohydrolase rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:AGB72418.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2846..3340
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4S1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88875.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_1501_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3634..4407
DNA (774bp) protein (258aa)
Inositol monophosphatase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNX4_RHITR rbh
inositol monophosphatase family protein rbh
Inositol monophosphatase family protein {ECO:0000313|EMBL:AGB72416.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..5487)
DNA (975bp) protein (325aa)
Lysophospholipase L2 protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQM8_RHITR rbh
lysophospholipase L2 protein rbh
Lysophospholipase L2 protein {ECO:0000313|EMBL:AGB72415.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5621..6688)
DNA (1068bp) protein (356aa)
cAMP-dependent Kef-type K+ transport system n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQK8_RHITR rbh
cAMP-dependent Kef-type K+ transport system rbh
cAMP-dependent Kef-type K+ transport system {ECO:0000313|EMBL:AGB72414.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_9
unknown

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comp(6692..6826)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1501_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6843..7322)
DNA (480bp) protein (160aa)
Regulatory protein, AsnC/Lrp n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLX3_RHITR
regulatory protein, AsnC/Lrp
Regulatory protein, AsnC/Lrp {ECO:0000313|EMBL:AGB72413.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7456..7872
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMD6_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB72412.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8226..8690
DNA (465bp) protein (155aa)
HSP20 family small heat shock protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNW8_RHITR rbh
HSP20 family small heat shock protein rbh
HSP20 family small heat shock protein {ECO:0000313|EMBL:AGB72411.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8823..9848)
DNA (1026bp) protein (342aa)
Sodium/bile acid symporter family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQM5_RHITR rbh
sodium/bile acid symporter family protein rbh
Sodium/bile acid symporter family protein {ECO:0000313|EMBL:AGB72410.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9957..10814
DNA (858bp) protein (286aa)
Transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQK3_RHITR rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGB72409.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_1501_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10880..11926)
DNA (1047bp) protein (349aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Low specificity L-threonine aldolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMD0_RHITR rbh
low specificity L-threonine aldolase rbh
SCNpilot_expt_500_bf_scaffold_1501_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12491..14119
DNA (1629bp) protein (543aa)
Glutamate synthase, large subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UB38_9RHIZ
Glutamate synthase, large subunit {ECO:0000313|EMBL:ENN87398.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ferredoxin-dependent glutamate synthase
Displaying 16 items

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