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SCNpilot_expt_500_bf_scaffold_1660

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1660_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..658)
DNA (657bp) protein (219aa)
Type VI protein secretion system FHA domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SW95_RHIET
Type VI protein secretion system FHA domain-containing protein {ECO:0000313|EMBL:AJC82986.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
type VI protein secretion system FHA domain-containing protein
SCNpilot_expt_500_bf_scaffold_1660_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648..1673)
DNA (1026bp) protein (342aa)
Type VI secretion system-associated protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S7X1_RHIET rbh
type VI secretion system-associated protein rbh
Type VI secretion system-associated protein {ECO:0000313|EMBL:AGS26133.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_500_bf_scaffold_1660_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1683..3422)
DNA (1740bp) protein (580aa)
type VI secretion system protein ImpG n=1 Tax=Rhizobium leguminosarum RepID=UPI00037255DA rbh
Type VI secretion system-associated protein {ECO:0000313|EMBL:AIC31005.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
impG; hypothetical protein; K11896 type VI secretion system protein ImpG rbh
SCNpilot_expt_500_bf_scaffold_1660_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3415..3924)
DNA (510bp) protein (170aa)
Type VI secretion system lysozyme-related protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WDV5_RHILT
Putative type VI secretion system protein TssE {ECO:0000313|EMBL:CDN51826.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
type VI secretion system lysozyme-related protein
SCNpilot_expt_500_bf_scaffold_1660_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3917..4741)
DNA (825bp) protein (275aa)
Putative virulence-island/protein involved in nitrogen fixation n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M3Z3_RHIL3 rbh
Type VI secretion system ImpE family protein {ECO:0000313|EMBL:AJD45634.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
impE; putative virulence-island/protein involved in nitrogen fixation; K11898 type VI secretion system protein ImpE rbh
SCNpilot_expt_500_bf_scaffold_1660_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..6141)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M3Z2_RHIL3 rbh
Type VI secretion system-associated protein {ECO:0000313|EMBL:AJD45633.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
impD; hypothetical protein; K11899 type VI secretion system protein ImpD rbh
SCNpilot_expt_500_bf_scaffold_1660_7
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6190..7668)
DNA (1479bp) protein (493aa)
Type VI secretion protein, EvpB/VC_A0108 family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NJL9_RHILT rbh
Type VI secretion system-associated protein {ECO:0000313|EMBL:AJD45632.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
impC; putative virulence-island/protein involved in nitrogen fixation; K11900 type VI secretion system protein ImpC rbh
SCNpilot_expt_500_bf_scaffold_1660_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7780..8295)
DNA (516bp) protein (172aa)
type VI secretion protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037A87F1
Type VI secretion system-associated protein {ECO:0000313|EMBL:AJD45631.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
type VI secretion system-associated protein
SCNpilot_expt_500_bf_scaffold_1660_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8401..9363)
DNA (963bp) protein (321aa)
Type VI secretion system-associated ImpA-related domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S8B7_RHIET rbh
type VI secretion system-associated ImpA-related domain-containing protein rbh
Type VI secretion system-associated ImpA-related domain-containing protein {ECO:0000313|EMBL:AGS26140.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_500_bf_scaffold_1660_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9668..12409
DNA (2742bp) protein (914aa)
Type VI secretion ATPase, ClpV1 family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H965_RHILT rbh
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EJB06925.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
clpV1; type VI secretion system ATPase protein ClpV1 rbh
SCNpilot_expt_500_bf_scaffold_1660_11
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12475..12951
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035CDF75 rbh
Cytoplasmic protein {ECO:0000313|EMBL:KEC79851.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein; K11903 type VI secretion system secreted protein Hcp rbh
SCNpilot_expt_500_bf_scaffold_1660_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..13700
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035FBF71
Uncharacterized protein {ECO:0000313|EMBL:AJD45627.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
SCNpilot_expt_500_bf_scaffold_1660_13
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13756..16080
DNA (2325bp) protein (775aa)
Putative fimbrial operon related protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M3Y5_RHIL3 rbh
Type VI secretion system Vgr family protein TssI {ECO:0000313|EMBL:CDN51816.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
putative fimbrial operon related protein rbh
SCNpilot_expt_500_bf_scaffold_1660_14
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16087..17154
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JXL2_AGRVS rbh
Aminoacyl tRNA synthetase anti-codon binding domain-like protein, PF12869 family {ECO:0000313|EMBL:CDN51815.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_1660_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17154..18746
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JXL3_AGRVS
Uncharacterized protein {ECO:0000313|EMBL:CDN51814.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1660_16
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18760..19248
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LW74_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:GAK73301.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1660_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19443..20108)
DNA (666bp) protein (222aa)
dihydroxyacetone kinase, L subunit; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-] rbh
Putative PTS-dependent dihydroxyacetone kinase,ADP-binding protein subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U5V4_9RHIZ rbh
Putative PTS-dependent dihydroxyacetone kinase,ADP-binding protein subunit {ECO:0000313|EMBL:ENN85653.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_1660_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20164..20274)
DNA (111bp) protein (37aa)
dihydroxyacetone kinase; K05878 dihydroxyacetone kinase, N-terminal domain [EC:2.7.1.-]
Putative transcriptional regulator and PTS-dependent dihydroxyacetone kinase, fusion protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TZ23_9RHIZ
Putative transcriptional regulator and PTS-dependent dihydroxyacetone kinase, fusion protein {ECO:0000313|EMBL:ENN85654.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Displaying 18 items

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