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SCNpilot_expt_500_bf_scaffold_6491

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6491_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..650)
DNA (648bp) protein (216aa)
Putative acyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFS6_RHITR rbh
putative acyltransferase rbh
Putative acyltransferase {ECO:0000313|EMBL:AGB69536.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6491_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1161..1823
DNA (663bp) protein (221aa)
UPI0003CDD823 related cluster n=1 Tax=unknown RepID=UPI0003CDD823
Uncharacterized protein {ECO:0000313|EMBL:ESW76874.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein; K09974 hypothetical protein
SCNpilot_expt_500_bf_scaffold_6491_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1852..2427)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URT1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN84420.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
acetyltransferase rbh
SCNpilot_expt_500_bf_scaffold_6491_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2504..3310)
DNA (807bp) protein (269aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TVD9_9RHIZ rbh
enoyl-[acyl-carrier-protein] reductase [NADH] rbh
SCNpilot_expt_500_bf_scaffold_6491_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3315..4538)
DNA (1224bp) protein (408aa)
3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDT1_RHITR rbh
3-oxoacyl-[acyl-carrier-protein] synthase rbh
3-oxoacyl-[acyl-carrier-protein] synthase {ECO:0000313|EMBL:AGB69533.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6491_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4592..5107)
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacte
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUF7_9RHIZ rbh
fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase rbh
SCNpilot_expt_500_bf_scaffold_6491_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5378..5797
DNA (420bp) protein (140aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WZ38_9RHIZ
Fur family transcriptional regulator {ECO:0000313|EMBL:KEA07972.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
irr; iron response regulator Irr
SCNpilot_expt_500_bf_scaffold_6491_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5857..6492)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHI9_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB69530.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6491_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6631..7110
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHE5_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB69529.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6491_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7190..7981)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDS7_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB69528.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6491_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8336..8734
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEG1_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57179.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_expt_500_bf_scaffold_6491_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9597..9977)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHI3_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69525.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6491_13
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10252..11256
DNA (1005bp) protein (335aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JGR5_AGRRK rbh
SCNpilot_expt_500_bf_scaffold_6491_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11253..11555
DNA (303bp) protein (101aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000381A123
SCNpilot_expt_500_bf_scaffold_6491_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11632..12267
DNA (636bp) protein (212aa)
Transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1Z9_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:ENN84408.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator; K07734 transcriptional regulator
SCNpilot_expt_500_bf_scaffold_6491_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12281..12877
DNA (597bp) protein (199aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Cytidylate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDS3_RHITR rbh
cmk; cytidylate kinase rbh
SCNpilot_expt_500_bf_scaffold_6491_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13059..14762
DNA (1704bp) protein (568aa)
30S ribosomal protein S1 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUE6_9RHIZ rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
rpsA; 30S ribosomal protein S1 rbh
SCNpilot_expt_500_bf_scaffold_6491_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15665..16498)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFR5_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69521.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 18 items

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