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SCNpilot_expt_500_bf_scaffold_6710

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6710_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
Glutathione S-transferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ48_RHITR
glutathione S-transferase protein
Glutathione S-transferase protein {ECO:0000313|EMBL:AGB71443.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257..1114)
DNA (858bp) protein (286aa)
Methyltransferase type 12 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJL9_RHITR rbh
methyltransferase type 12 rbh
Methyltransferase type 12 {ECO:0000313|EMBL:AGB71442.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1226..1963
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VDW9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN89272.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_6710_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2012..2278)
DNA (267bp) protein (89aa)
Usg family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL52_RHITR
Usg family protein
Usg family protein {ECO:0000313|EMBL:AGB71441.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2403..3269)
DNA (867bp) protein (289aa)
Putative polar amino acid ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMY3_RHITR rbh
putative polar amino acid ABC transporter, permease protein rbh
Putative polar amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGB71440.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3266..4066)
DNA (801bp) protein (267aa)
Putative polar amino acid ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMV2_RHITR rbh
putative polar amino acid ABC transporter, permease protein rbh
Putative polar amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGB71439.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..4967)
DNA (783bp) protein (261aa)
Putative amino-acid binding protein periplasmic protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UGG4_9RHIZ rbh
Putative amino-acid binding protein periplasmic protein {ECO:0000313|EMBL:ENN89268.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative polar amino acid ABC transporter, substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_6710_8
unknown

Not on your lists

comp(5449..5718)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6710_9
unknown

Not on your lists

comp(5718..7049)
DNA (1332bp) protein (444aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6710_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7097..7783
DNA (687bp) protein (229aa)
OmpA/MotB domain protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VDW4_9RHIZ rbh
OmpA/MotB domain protein {ECO:0000313|EMBL:ENN89267.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
OmpA family protein rbh
SCNpilot_expt_500_bf_scaffold_6710_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7834..8364)
DNA (531bp) protein (177aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL47_RHITR rbh
mobB; molybdopterin-guanine dinucleotide biosynthesis protein B rbh
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:AGB71436.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8361..9011)
DNA (651bp) protein (217aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
Molybdenum cofactor guanylyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMY1_RHITR rbh
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A rbh
SCNpilot_expt_500_bf_scaffold_6710_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9022..9933)
DNA (912bp) protein (304aa)
Putative transporter protein, RhaT family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMU7_RHITR rbh
putative transporter protein, RhaT family rbh
Putative transporter protein, RhaT family {ECO:0000313|EMBL:AGB71434.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10269..11939
DNA (1671bp) protein (557aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ39_RHITR rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGB71433.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11891..12751
DNA (861bp) protein (287aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UGG1_9RHIZ
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ENN89263.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
methyl-accepting chemotaxis protein
SCNpilot_expt_500_bf_scaffold_6710_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12851..13603)
DNA (753bp) protein (251aa)
Beta-lactamase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJL3_RHITR rbh
beta-lactamase family protein rbh
Beta-lactamase family protein {ECO:0000313|EMBL:AGB71432.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13622..14671)
DNA (1050bp) protein (350aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL40_RHITR rbh
moaA; molybdenum cofactor biosynthesis protein A rbh
SCNpilot_expt_500_bf_scaffold_6710_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14805..15179
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMX7_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71430.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_6710_19
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15214..15885
DNA (672bp) protein (224aa)
Low temperature requirement protein LtrA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMU3_RHITR rbh
ltrA; low temperature requirement protein LtrA rbh
Putative transmembrane protein {ECO:0000313|EMBL:ENN89259.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Displaying 19 items

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