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SCNpilot_expt_500_bf_scaffold_9855

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9855_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1197)
DNA (1197bp) protein (399aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIT4_RHITR rbh
pstC1; phosphate ABC transporter, permease protein PstC rbh
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:AGB69985.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1260..2294)
DNA (1035bp) protein (345aa)
Phosphate ABC transporter, substrate-binding protein PstS n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIQ9_RHITR rbh
pstS1; phosphate ABC transporter, substrate-binding protein PstS rbh
Phosphate ABC transporter, substrate-binding protein PstS {ECO:0000313|EMBL:AGB69984.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2481..3431)
DNA (951bp) protein (317aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Phosphate regulon sensor kinase PhoR n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEZ4_RHITR rbh
phoR; phosphate regulon sensor kinase PhoR rbh
SCNpilot_expt_500_bf_scaffold_9855_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3951..4604
DNA (654bp) protein (218aa)
Polyphosphate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFM2_RHITR rbh
polyphosphate kinase rbh
Polyphosphate kinase {ECO:0000313|EMBL:AGB69982.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4544..4783
DNA (240bp) protein (80aa)
Polyphosphate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFM2_RHITR
polyphosphate kinase
Polyphosphate kinase {ECO:0000313|EMBL:AGB69982.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4866..6113)
DNA (1248bp) protein (416aa)
Putative regulator protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGZ3_RHITR rbh
putative regulator protein rbh
Putative regulator protein {ECO:0000313|EMBL:AGB69981.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6433..7428
DNA (996bp) protein (332aa)
2-nitropropane dioxygenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIS8_RHITR
2-nitropropane dioxygenase
2-nitropropane dioxygenase {ECO:0000313|EMBL:AGB69980.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_8
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7877..8125
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J8Y8_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK78382.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_500_bf_scaffold_9855_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8201..8452
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNY4_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71785.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8684..9085
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X7B2_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL51768.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_500_bf_scaffold_9855_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9223..9828)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U0S0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN83978.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9855_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10228..10974
DNA (747bp) protein (249aa)
Glycosyl transferase, family 2 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEY9_RHITR rbh
glycosyl transferase, family 2 rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:AGB69978.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11133..11432
DNA (300bp) protein (100aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFL8_RHITR
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AGB69977.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11411..11863)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGY8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69976.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_9855_15
unknown

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comp(12121..12291)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9855_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12445..12825)
DNA (381bp) protein (127aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UQG7_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ENN83975.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative transcriptional regulator
Displaying 16 items

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