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SCNpilot_expt_500_bf_scaffold_11072

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11072_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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429..632
DNA (204bp) protein (68aa)
Cold-shock protein CspA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWR0_RHITR
cspA1; cold-shock protein CspA
Cold-shock protein CspA {ECO:0000313|EMBL:AGB75682.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_11072_2
unknown

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comp(812..1357)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_11072_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1484..1750)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7WT95_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KEA03068.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_11072_4
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1898..2611)
DNA (714bp) protein (238aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2H8E5_BURVI rbh
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ERJ34463.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_500_bf_scaffold_11072_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3162..3671
DNA (510bp) protein (170aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7D9_CAUSK
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABZ69677.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_500_bf_scaffold_11072_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3732..4295
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1F5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84188.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_11072_7
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4416..5069
DNA (654bp) protein (218aa)
Putative glutathione S-transferase I {ECO:0000313|EMBL:CCM74317.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CCM74317.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Putative glutathione S-transferase I n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PT48_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_11072_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5127..5720)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVG4_RHITR rbh
transcriptional regulator, TetR family rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGB74139.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 8 items

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