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SCNpilot_expt_500_bf_scaffold_8408

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8408_1
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..393
DNA (393bp) protein (131aa)
Alanyl-tRNA synthetase n=1 Tax=Rhizobium sp. AP16 RepID=J2WY64_9RHIZ
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EJK87305.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
alanyl-tRNA synthetase
SCNpilot_expt_500_bf_scaffold_8408_2
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(604..1227)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEK9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR51123.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
SCNpilot_expt_500_bf_scaffold_8408_3
unknown

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1887..2177
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8408_4
unknown

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comp(2195..2329)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8408_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2437..3024)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003751261
curli production assembly/transport component CsgG; K06214 curli production assembly/transport component CsgG
Curli production assembly/transport component CsgG {ECO:0000313|EMBL:ACF02253.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_expt_500_bf_scaffold_8408_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3522..4049)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ32_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE06470.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8408_7
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4031..4459)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ33_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE06471.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
SCNpilot_expt_500_bf_scaffold_8408_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4487..4900)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCV7_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB67678.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_500_bf_scaffold_8408_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4860..5411)
DNA (552bp) protein (184aa)
Curlin associated repeat protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VPB5_RHOPX
curlin associated repeat-containing protein
Curlin associated repeat protein {ECO:0000313|EMBL:ADU43664.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_500_bf_scaffold_8408_10
unknown

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comp(5958..6170)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8408_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6637..7062
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VPB7_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43666.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_500_bf_scaffold_8408_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7400..8185)
DNA (786bp) protein (262aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TW17_9RHIZ rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ENN84629.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
two component LuxR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_8408_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8173..9039)
DNA (867bp) protein (289aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6USG8_9RHIZ rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ENN84630.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Crp/FNR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_8408_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9295..10512)
DNA (1218bp) protein (406aa)
Polysaccharide pyruvyl transferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV56_9RHIZ rbh
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ENN84631.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
polysaccharide pyruvyl transferase rbh
SCNpilot_expt_500_bf_scaffold_8408_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10509..11933)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0J0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN84632.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_8408_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12072..12344
DNA (273bp) protein (91aa)
Glycoside hydrolase, family 16 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U2S4_9RHIZ
Glycoside hydrolase, family 16 {ECO:0000313|EMBL:ENN84633.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glycoside hydrolase family protein
Displaying 16 items

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