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SCNpilot_expt_500_bf_scaffold_8543

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8543_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..206
DNA (204bp) protein (68aa)
Membrane protein insertase YidC n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U138_9RHIZ
inner membrane protein OxaA
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8543_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(287..1216)
DNA (930bp) protein (310aa)
Dienelactone hydrolase-like protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7Z9_9RHIZ rbh
Dienelactone hydrolase-like protein {ECO:0000313|EMBL:ENN86378.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dienelactone hydrolase rbh
SCNpilot_expt_500_bf_scaffold_8543_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1319..2146)
DNA (828bp) protein (276aa)
Transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5P0_9RHIZ rbh
Transcription regulator protein {ECO:0000313|EMBL:ENN86377.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator protein; K13652 AraC family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_8543_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2246..2533)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JHQ2_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM29444.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_500_bf_scaffold_8543_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2654..3313
DNA (660bp) protein (220aa)
Probable GTP-binding protein EngB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIM7_RHITR rbh
ysxC; ribosome biogenesis GTP-binding protein YsxC rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8543_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3389..3946)
DNA (558bp) protein (186aa)
Beta-Ig-H3/fasciclin n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXG6_9RHIZ rbh
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:ENN86375.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative beta-Ig-H3/fasciclin rbh
SCNpilot_expt_500_bf_scaffold_8543_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4056..4769)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEU4_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB69928.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8543_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4766..5305)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFG7_RHITR rbh
RNA polymerase, sigma-24 subunit, ECF subfamily rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8543_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5590..6000
DNA (411bp) protein (137aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Acetylglutamate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGT5_RHITR
argB; acetylglutamate kinase
Displaying 9 items

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