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SCNpilot_expt_500_bf_scaffold_8939

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8939_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(509..925)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4H5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37462.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8939_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(928..1410)
DNA (483bp) protein (161aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|SAAS:SAAS00071052}; EC=3.6.1.31 {ECO:0000256|SAAS:SAAS00071044};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hisE2; phosphoribosyl-ATP pyrophosphohydrolase (EC:3.5.4.19); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP diphosphatase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGF6_9BRAD
SCNpilot_expt_500_bf_scaffold_8939_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2583..3344)
DNA (762bp) protein (254aa)
Siderophore ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWN7_RHITR rbh
siderophore ABC transporter, ATP-binding protein rbh
Siderophore ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB75693.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8939_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3341..3604)
DNA (264bp) protein (88aa)
Iron ABC transporter permease n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KA98_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:EXL05019.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
iron-siderophore ABC transporter; permease component; K02015 iron complex transport system permease protein
SCNpilot_expt_500_bf_scaffold_8939_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3613..4356)
DNA (744bp) protein (248aa)
ABC transporter permease n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000373F595
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:EJJ26262.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
transport system permease; K02015 iron complex transport system permease protein
SCNpilot_expt_500_bf_scaffold_8939_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4353..5378)
DNA (1026bp) protein (342aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037AEE93 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJC82822.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
putative substrate-binding component of ABC transporter; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_8939_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5573..6199)
DNA (627bp) protein (209aa)
Putative S-methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVH9_RHITR rbh
putative S-methyltransferase rbh
Putative S-methyltransferase {ECO:0000313|EMBL:AGB74154.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8939_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6159..6425)
DNA (267bp) protein (89aa)
Putative S-methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVH9_RHITR
putative S-methyltransferase
Putative S-methyltransferase {ECO:0000313|EMBL:AGB74154.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8939_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6489..7178)
DNA (690bp) protein (230aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V981_9RHIZ rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ENN89761.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
amino acid ABC transporter, permease protein rbh
SCNpilot_expt_500_bf_scaffold_8939_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7190..7915)
DNA (726bp) protein (242aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VF78_9RHIZ rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ENN89762.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
polar amino acid ABC transporter, inner membrane subunit; K02029 polar amino acid transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_8939_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7928..8701)
DNA (774bp) protein (258aa)
Putative substrate-binding protein component of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UHN4_9RHIZ rbh
Putative substrate-binding protein component of ABC transporter {ECO:0000313|EMBL:ENN89763.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
amino acid ABC transporter, substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_8939_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8745..9494)
DNA (750bp) protein (250aa)
Arginine/ornithine transport ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UB63_9RHIZ rbh
Arginine/ornithine transport ATP-binding protein {ECO:0000313|EMBL:ENN89764.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
amino acid ABC transporter, ATP-binding protein rbh
Displaying 12 items

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