ggKbase home page

SCNpilot_expt_500_bf_scaffold_8940

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8940_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..687
DNA (687bp) protein (229aa)
atpA; F0F1 ATP synthase subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
ATP synthase subunit alpha n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JBZ7_AGRRK
SCNpilot_expt_500_bf_scaffold_8940_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

737..1120
DNA (384bp) protein (128aa)
ATP synthase alpha chain n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VEU0_9RHIZ
ATP synthase alpha chain {ECO:0000313|EMBL:ENN89577.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
atpA; ATP synthase F1, alpha subunit
SCNpilot_expt_500_bf_scaffold_8940_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1150..2034
DNA (885bp) protein (295aa)
ATP synthase gamma chain n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRE9_RHITR rbh
atpG; ATP synthase F1, gamma subunit rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8940_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2059..3351
DNA (1293bp) protein (431aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ATP synthase subunit beta n=6 Tax=Rhizobium RepID=N6V707_9RHIZ rbh
atpD; ATP synthase F1, beta subunit rbh
SCNpilot_expt_500_bf_scaffold_8940_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3567..3974
DNA (408bp) protein (136aa)
ATP synthase epsilon chain n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN86_RHITR
atpC; ATP synthase F1, epsilon subunit
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8940_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4315..5145)
DNA (831bp) protein (277aa)
Transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UH85_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:ENN89573.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator, LysR family rbh
SCNpilot_expt_500_bf_scaffold_8940_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5263..6408
DNA (1146bp) protein (382aa)
Alcohol dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VET7_9RHIZ rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:ENN89572.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
iron-containing alcohol dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_8940_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6410..7867
DNA (1458bp) protein (486aa)
Betaine aldehyde dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8T7_9RHIZ rbh
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase rbh
Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:ENN89571.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_8940_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8497..9096
DNA (600bp) protein (200aa)
Mandelate racemase/muconate lactonizing enzyme n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMU9_RHITR rbh
mandelate racemase/muconate lactonizing enzyme rbh
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:AGB72703.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8940_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9039..10229)
DNA (1191bp) protein (397aa)
Putative acyltransferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN83_RHITR rbh
putative acyltransferase protein rbh
Putative acyltransferase protein {ECO:0000313|EMBL:AGB72702.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8940_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10402..10977)
DNA (576bp) protein (192aa)
NADPH-dependent FMN reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPR1_RHITR rbh
NADPH-dependent FMN reductase rbh
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AGB72701.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8940_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11051..11512
DNA (462bp) protein (154aa)
Redox-sensitive transcriptional activator SoxR n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRH2_RHITR
soxR; redox-sensitive transcriptional activator SoxR
Redox-sensitive transcriptional activator SoxR {ECO:0000313|EMBL:AGB72700.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8940_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11523..12668)
DNA (1146bp) protein (382aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Glycerol-3-phosphate dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8T4_9RHIZ rbh
aerobic glycerol-3-phosphate dehydrogenase rbh
Displaying 13 items

View Taxonomy