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SCNpilot_expt_500_bf_scaffold_3273

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3273_1
unknown

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comp(73..348)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3273_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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531..1325
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWR3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN85186.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
HpcH/HpaI aldolase rbh
SCNpilot_expt_500_bf_scaffold_3273_3
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1476..1625)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DM02_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK83972.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
putative lipoprotein
SCNpilot_expt_500_bf_scaffold_3273_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1848..2918
DNA (1071bp) protein (357aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2B523_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJJ31115.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
transcription regulator protein; K02529 LacI family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3273_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3119..4084
DNA (966bp) protein (322aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Rhizobium sp. CF142 RepID=J1TGS3_9RHIZ rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EJJ31116.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
xylose isomerase domain-containing protein
SCNpilot_expt_500_bf_scaffold_3273_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4096..5217
DNA (1122bp) protein (374aa)
Putative dehydrogenase n=1 Tax=Rhizobium sp. CF142 RepID=J2LC78_9RHIZ rbh
Putative dehydrogenase {ECO:0000313|EMBL:EJJ31117.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
oxidoreductase domain-containing protein
SCNpilot_expt_500_bf_scaffold_3273_7
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5424..6671
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BFC32 rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EEA03325.1}; Flags: Precursor;; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_3273_8
unknown

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comp(6827..7408)
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3273_9
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7644..8552
DNA (909bp) protein (303aa)
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000364C019 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KFG69879.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_3273_10
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8556..8780
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036864C2
sugar ABC transporter; K02023 multiple sugar transport system ATP-binding protein
Small molecule transporter {ECO:0000313|EMBL:KFC69949.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Displaying 10 items

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