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SCNpilot_expt_500_bf_scaffold_3424

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3424_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1083
DNA (1083bp) protein (361aa)
HemY domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRI3_RHITR rbh
HemY domain-containing protein rbh
HemY domain-containing protein {ECO:0000313|EMBL:AGB72749.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1197..1682
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRL6_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB72750.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1672..2418
DNA (747bp) protein (249aa)
Glutamine amidotransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPV1_RHITR rbh
glutamine amidotransferase rbh
Glutamine amidotransferase {ECO:0000313|EMBL:AGB72751.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2404..3024)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNB9_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB72752.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3035..4291)
DNA (1257bp) protein (419aa)
Putative major facilitator superfamily (MFS) drug efflux transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMY8_RHITR rbh
putative major facilitator superfamily (MFS) drug efflux transporter rbh
Putative major facilitator superfamily (MFS) drug efflux transporter {ECO:0000313|EMBL:AGB72753.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4365..4721
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UHB4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89618.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
YGGT family protein
SCNpilot_expt_500_bf_scaffold_3424_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4718..5035
DNA (318bp) protein (106aa)
UPF0235 protein RTCIAT899_CH16960 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRM1_RHITR
hypothetical protein
UPF0235 protein RTCIAT899_CH16960 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5036..5572)
DNA (537bp) protein (179aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] rbh
Inorganic pyrophosphatase n=2 Tax=Rhizobium leguminosarum RepID=J0V6C9_RHILV rbh
SCNpilot_expt_500_bf_scaffold_3424_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5734..6240)
DNA (507bp) protein (169aa)
Putative acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNC3_RHITR rbh
putative acetyltransferase rbh
Putative acetyltransferase {ECO:0000313|EMBL:AGB72757.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6440..7144)
DNA (705bp) protein (235aa)
GTP-binding protein TypA/BipA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMZ2_RHITR
typA; GTP-binding protein TypA/BipA
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:AGB72758.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7125..8201)
DNA (1077bp) protein (359aa)
GTP-binding protein TypA/BipA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMZ2_RHITR
typA; GTP-binding protein TypA/BipA
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:AGB72758.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_12
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8393..8866
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WY47_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL06528.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3424_13
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9504..10733
DNA (1230bp) protein (410aa)
Chromate transport protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XYS9_RHIRD rbh
Chromate transporter {ECO:0000313|EMBL:KGE80303.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
chromate transport protein; K07240 chromate transporter rbh
SCNpilot_expt_500_bf_scaffold_3424_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10792..12855)
DNA (2064bp) protein (688aa)
Peptidyl-dipeptidase dcp (Dipeptidyl carboxypeptidase) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPW1_RHITR rbh
peptidyl-dipeptidase dcp (Dipeptidyl carboxypeptidase) rbh
Peptidyl-dipeptidase dcp (Dipeptidyl carboxypeptidase) {ECO:0000313|EMBL:AGB72761.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12953..13594)
DNA (642bp) protein (214aa)
Lysine exporter protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNC8_RHITR rbh
lysine exporter protein rbh
Lysine exporter protein {ECO:0000313|EMBL:AGB72762.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13757..14239
DNA (483bp) protein (161aa)
Transcriptional regulator, MarR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMZ5_RHITR
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGB72763.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3424_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14307..15530)
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
argG; argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5] rbh
Argininosuccinate synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8X3_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_3424_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15711..16115
DNA (405bp) protein (135aa)
Putative oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRM8_RHITR
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AGB72765.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 18 items

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