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SCNpilot_expt_500_bf_scaffold_3599

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3599_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..445
DNA (444bp) protein (148aa)
DNA repair protein radA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKN3_RHITR
radA; DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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537..1160
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXA5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN86310.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
cvpA; colicin V production protein; K03558 membrane protein required for colicin V production rbh
SCNpilot_expt_500_bf_scaffold_3599_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1325..2809
DNA (1485bp) protein (495aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Amidophosphoribosyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGV8_RHITR rbh
purF; amidophosphoribosyltransferase rbh
SCNpilot_expt_500_bf_scaffold_3599_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2890..3630
DNA (741bp) protein (247aa)
Putative short-chain dehydrogenase/reductase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7Q1_9RHIZ rbh
Putative short-chain dehydrogenase/reductase {ECO:0000313|EMBL:ENN86308.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
short-chain dehydrogenase/reductase rbh
SCNpilot_expt_500_bf_scaffold_3599_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3855..5246
DNA (1392bp) protein (464aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Cysteine--tRNA ligase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIT6_RHITR rbh
cysS; cysteinyl-tRNA synthetase rbh
SCNpilot_expt_500_bf_scaffold_3599_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5243..5722
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKJ5_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70604.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5719..6210
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGV3_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70603.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6203..6679
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA8_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70602.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6676..7623
DNA (948bp) protein (316aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Proline iminopeptidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIT1_RHITR rbh
proline iminopeptidase rbh
SCNpilot_expt_500_bf_scaffold_3599_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7669..8517
DNA (849bp) protein (283aa)
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKM3_RHITR
2-isopropylmalate synthase/homocitrate synthase family protein
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:AGB70600.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8514..9167
DNA (654bp) protein (218aa)
2-isopropylmalate synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7P5_9RHIZ
2-isopropylmalate synthase {ECO:0000313|EMBL:ENN86303.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
2-isopropylmalate synthase/homocitrate synthase family protein
SCNpilot_expt_500_bf_scaffold_3599_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..10187
DNA (912bp) protein (304aa)
Putative RarD protein, chloramphenicol transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKI9_RHITR rbh
rarD; putative RarD protein, chloramphenicol transporter rbh
Putative RarD protein, chloramphenicol transporter {ECO:0000313|EMBL:AGB70599.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10216..10764)
DNA (549bp) protein (183aa)
Multicopper oxidase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGV0_RHITR rbh
multicopper oxidase family protein rbh
Multicopper oxidase family protein {ECO:0000313|EMBL:AGB70598.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10996..11214
DNA (219bp) protein (73aa)
Peptidoglycan-binding LysM domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA4_RHITR
peptidoglycan-binding LysM domain-containing protein
Peptidoglycan-binding LysM domain-containing protein {ECO:0000313|EMBL:AGB70597.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11339..13264
DNA (1926bp) protein (642aa)
Peptidoglycan-binding LysM domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA4_RHITR rbh
peptidoglycan-binding LysM domain-containing protein rbh
Peptidoglycan-binding LysM domain-containing protein {ECO:0000313|EMBL:AGB70597.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3599_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13216..13749
DNA (534bp) protein (178aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIS6_RHITR
ABC transporter, ATP-binding/permease protein
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:AGB70596.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 16 items

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