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SCNpilot_expt_500_bf_scaffold_3724

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3724_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..77)
DNA (75bp) protein (25aa)
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:AGB72631.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(103..2544)
DNA (2442bp) protein (814aa)
glycine cleavage system T protein; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
Glycine cleavage system T protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLT4_AGRRK rbh
Putative dimethylglycine oxidase {ECO:0000313|EMBL:GAJ92002.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_expt_500_bf_scaffold_3724_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2702..3436
DNA (735bp) protein (245aa)
Transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8L9_9RHIZ rbh
Transcription regulator protein {ECO:0000313|EMBL:ENN86558.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator protein rbh
SCNpilot_expt_500_bf_scaffold_3724_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3470..4753)
DNA (1284bp) protein (428aa)
Oxidoreductase protein OrdL n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6B3_9RHIZ rbh
Oxidoreductase protein OrdL {ECO:0000313|EMBL:ENN86557.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative oxidoreductase
SCNpilot_expt_500_bf_scaffold_3724_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4783..5928)
DNA (1146bp) protein (382aa)
Oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLE7_AGRRK rbh
oxidoreductase rbh
Oxidoreductase protein {ECO:0000313|EMBL:ACM28646.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_500_bf_scaffold_3724_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5958..6692)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UY31_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN86555.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_3724_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6758..7597)
DNA (840bp) protein (280aa)
Amino acid ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JLE5_AGRRK rbh
amino acid ABC transporter rbh
Amino acid ABC transporter {ECO:0000313|EMBL:KEA03726.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_expt_500_bf_scaffold_3724_8
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7622..8284)
DNA (663bp) protein (221aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. AP16 RepID=J2DDC6_9RHIZ rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJK87939.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
amino acid ABC transporter rbh
SCNpilot_expt_500_bf_scaffold_3724_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8284..8928)
DNA (645bp) protein (215aa)
Amino acid ABC transporter permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6A6_9RHIZ rbh
Amino acid ABC transporter permease protein {ECO:0000313|EMBL:ENN86552.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
amino acid ABC transporter rbh
SCNpilot_expt_500_bf_scaffold_3724_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10833..11906
DNA (1074bp) protein (358aa)
NMT1-like family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX99_RHITR rbh
NMT1-like family protein rbh
NMT1-like family protein {ECO:0000313|EMBL:AGB75336.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11964..12782
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVS0_RHITR rbh
ABC transporter, permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AGB75337.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12779..13600
DNA (822bp) protein (274aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVM1_RHITR rbh
ABC transporter, ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB75338.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13603..14421
DNA (819bp) protein (273aa)
Urea carboxylase-associated protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYX0_RHITR rbh
urea carboxylase-associated protein rbh
Urea carboxylase-associated protein {ECO:0000313|EMBL:AGB75339.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14437..15087
DNA (651bp) protein (217aa)
Urea carboxylase-associated protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZ07_RHITR rbh
urea carboxylase-associated protein rbh
Urea carboxylase-associated protein {ECO:0000313|EMBL:AGB75340.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15089..18586
DNA (3498bp) protein (1166aa)
Urea carboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXA4_RHITR rbh
uca; urea carboxylase rbh
Urea carboxylase {ECO:0000313|EMBL:AGB75341.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_3724_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18586..19722
DNA (1137bp) protein (379aa)
Allophanate hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVS4_RHITR rbh
allophanate hydrolase rbh
Allophanate hydrolase {ECO:0000313|EMBL:AGB75342.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 16 items

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