ggKbase home page

SCNpilot_expt_500_bf_scaffold_3997

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3997_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1091)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0A0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31858.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
XRE family transcriptional regulator; K07110
SCNpilot_expt_500_bf_scaffold_3997_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1230..1655
DNA (426bp) protein (142aa)
Thioesterase superfamily protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QGB9_RHOPT
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACF01156.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_expt_500_bf_scaffold_3997_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1800..3131
DNA (1332bp) protein (444aa)
prpD2; 2-methylcitrate dehydratase (EC:4.2.1.79); K01720 2-methylcitrate dehydratase [EC:4.2.1.79]
2-methylcitrate dehydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2N1U3_9RHIZ
2-methylcitrate dehydratase {ECO:0000313|EMBL:EKF41448.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_500_bf_scaffold_3997_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3144..3908
DNA (765bp) protein (255aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.5); K01659 2-methylcitrate synthase [EC:2.3.3.5]
Citrate synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWQ7_9BRAD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_500_bf_scaffold_3997_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3905..4246
DNA (342bp) protein (114aa)
prpC; methylcitrate synthase (EC:2.3.3.1); K01659 2-methylcitrate synthase [EC:2.3.3.5]
Citrate synthase n=1 Tax=Nitratireductor indicus C115 RepID=K2PJV9_9RHIZ
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_500_bf_scaffold_3997_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4257..5174
DNA (918bp) protein (306aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
prpB; carboxyphosphonoenolpyruvate phosphonomutase (EC:2.7.8.23); K01003 carboxyvinyl-carboxyphosphonate phosphorylmutase [EC:2.7.8.23] rbh
Carboxyphosphonoenolpyruvate phosphonomutase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JFJ3_9PROT rbh
SCNpilot_expt_500_bf_scaffold_3997_7
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5201..5863
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QDW6_GLUHA rbh
Uncharacterized protein {ECO:0000313|EMBL:EFG84757.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
hypothetical protein; K09765 hypothetical protein
SCNpilot_expt_500_bf_scaffold_3997_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5897..7117)
DNA (1221bp) protein (407aa)
Rieske (2Fe-2S) protein n=1 Tax=Rhizobium giardinii RepID=UPI0003732DD2 rbh
Putative dioxygenase, alpha-subunit {ECO:0000313|EMBL:AHK43606.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
putative dioxygenase, alpha-subunit; K00479 Rieske 2Fe-2S family protein rbh
SCNpilot_expt_500_bf_scaffold_3997_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7610..8179
DNA (570bp) protein (190aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PSK3_RHIE6
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ACE91701.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_expt_500_bf_scaffold_3997_10
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8189..8992
DNA (804bp) protein (268aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KJ49_METEX rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EHP92428.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_3997_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9349..9660
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:CCE96977.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_500_bf_scaffold_3997_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9808..10275
DNA (468bp) protein (156aa)
AraC family transcriptional regulator n=2 Tax=Rhizobium leguminosarum RepID=UPI0003679BE8
AraC family transcriptional regulator protein {ECO:0000313|EMBL:AJD45679.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
AraC family transcriptional regulator
Displaying 12 items

View Taxonomy