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SCNpilot_expt_500_bf_scaffold_10212

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10212_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(95..931)
DNA (837bp) protein (279aa)
Tyrosyl-tRNA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPW3_9BRAD rbh
Tyrosyl-tRNA synthetase {ECO:0000313|EMBL:ERF84789.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
alpha/beta hydrolase fold protein rbh
SCNpilot_expt_500_bf_scaffold_10212_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(958..1704)
DNA (747bp) protein (249aa)
Putative short-chain dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZEY7_9PROT rbh
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EKM98190.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative short-chain dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_10212_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1879..2787
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XND2_9PROT rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKM98189.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hcaR; transcriptional regulator, LysR family rbh
SCNpilot_expt_500_bf_scaffold_10212_4
unknown

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comp(3471..3659)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10212_5
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3757..4119)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCAE3
Uncharacterized protein {ECO:0000313|EMBL:AJK49917.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10212_6
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4190..4936)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier protein] reductase FabG {ECO:0000313|EMBL:AJK49918.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AJK49918.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB198 rbh
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_10212_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5027..6001)
DNA (975bp) protein (325aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB196 rbh
ABC transporter subfamily C PrsD {ECO:0000313|EMBL:ERF84753.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_10212_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6117..6503
DNA (387bp) protein (129aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB195
TetR family transcriptional regulator {ECO:0000313|EMBL:KIZ43231.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
TetR family transcriptional regulator
Displaying 8 items

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