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SCNpilot_expt_500_bf_scaffold_10352

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10352_1
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..845
DNA (843bp) protein (281aa)
ABC transporter permease n=1 Tax=gamma proteobacterium WG36 RepID=UPI0003822831 rbh
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABM56198.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_expt_500_bf_scaffold_10352_2
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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849..1664
DNA (816bp) protein (272aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TC37_DESML rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EPR34110.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_10352_3
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1672..2823
DNA (1152bp) protein (384aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IUP0_RAHAC
ATPase component of various ABC-type transport systems with duplicated ATPase domain
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:AEX51683.1}; TaxID=745277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC; 105701 / NCIMB 13365 / CIP 78.65).;"
SCNpilot_expt_500_bf_scaffold_10352_4
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2765..3283
DNA (519bp) protein (173aa)
ABC transporter n=1 Tax=Rahnella aquatilis HX2 RepID=H8NQ42_RAHAQ
ABC transporter
ABC transporter {ECO:0000313|EMBL:AFE57930.1}; TaxID=1151116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis HX2.;"
SCNpilot_expt_500_bf_scaffold_10352_5
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3725..4249
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037455D1
Urease-associated protein {ECO:0000313|EMBL:GAN51129.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10352_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4397..5134)
DNA (738bp) protein (246aa)
DNA polymerase III subunit epsilon DnaQ-like protein {ECO:0000313|EMBL:AJD44731.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AJD44731.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Rhizobium mongolense RepID=UPI0003B3653E
SCNpilot_expt_500_bf_scaffold_10352_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5317..5961
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KEA04222.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_expt_500_bf_scaffold_10352_8
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6180..6524
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JEQ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL63550.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10352_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7065..7667)
DNA (603bp) protein (201aa)
ATP-dependent protease La n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWC2_RHITR rbh
ATP-dependent protease La rbh
ATP-dependent protease La {ECO:0000313|EMBL:AGB75537.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 9 items

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