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SCNpilot_expt_500_bf_scaffold_14223

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_14223_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..179
DNA (177bp) protein (59aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNH4_RHITR
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
SCNpilot_expt_500_bf_scaffold_14223_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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492..1337
DNA (846bp) protein (282aa)
Outer membrane protein assembly factor BamD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJT5_RHITR rbh
putative lipoprotein rbh
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_14223_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1350..2981
DNA (1632bp) protein (544aa)
DNA repair protein RecN n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK89_RHITR rbh
recN; DNA repair protein RecN rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_14223_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3128..3760
DNA (633bp) protein (211aa)
Chloramphenicol acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLS0_RHITR rbh
chloramphenicol acetyltransferase rbh
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:AGB71641.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_14223_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3832..4257
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L6T7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ29227.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_expt_500_bf_scaffold_14223_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4359..5054)
DNA (696bp) protein (232aa)
CDP-diacylglycerol diphosphatase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U9Y7_9RHIZ rbh
CDP-diacylglycerol diphosphatase {ECO:0000313|EMBL:ENN89379.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative CDP-diacylglycerol pyrophosphatase rbh
SCNpilot_expt_500_bf_scaffold_14223_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5402..6820
DNA (1419bp) protein (473aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
DNA ligase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U542_9RHIZ
ligA; DNA ligase, NAD-dependent
SCNpilot_expt_500_bf_scaffold_14223_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6912..7448
DNA (537bp) protein (179aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
DNA ligase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNG9_RHITR
ligA; DNA ligase, NAD-dependent
Displaying 8 items

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