name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_4026_1
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..327
|
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WSK8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK85998.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_4026_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(353..820)
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6B2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89380.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative globin
|
|
SCNpilot_expt_500_bf_scaffold_4026_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1084..2067
|
Putative rubrerythrin n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI27_RHITR
rbh
putative rubrerythrin
rbh
Putative rubrerythrin {ECO:0000313|EMBL:AGB69744.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2146..2658)
|
Transglutaminase family protein cysteine peptidase btlcp n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGC5_RHITR
rbh
transglutaminase family protein cysteine peptidase btlcp
rbh
Transglutaminase family protein cysteine peptidase btlcp {ECO:0000313|EMBL:AGB69746.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2981..3793)
|
2-hydroxymuconic semialdehyde hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LF13_RHITR
rbh
2-hydroxymuconic semialdehyde hydrolase
rbh
2-hydroxymuconic semialdehyde hydrolase {ECO:0000313|EMBL:AGB69747.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4057..4608
|
Translation initiation factor IF-3 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LED2_RHITR
rbh
infC; translation initiation factor IF-3
rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4930..5133
|
50S ribosomal protein L35 n=5 Tax=Rhizobium/Agrobacterium group RepID=RL35_AGRRK
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5171..5575
|
50S ribosomal protein L20 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V876_9RHIZ
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
rplT; 50S ribosomal protein L20
|
|
SCNpilot_expt_500_bf_scaffold_4026_9
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5904..6596
|
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Rhizobium/Agrobacterium group RepID=SYFA_AGRRK
|
|
SCNpilot_expt_500_bf_scaffold_4026_10
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6556..6942
|
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VE59_9RHIZ
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_4026_9].
|
|
SCNpilot_expt_500_bf_scaffold_4026_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6959..9382
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UGS5_9RHIZ
rbh
pheT; phenylalanyl-tRNA synthetase, beta subunit
rbh
|
|
SCNpilot_expt_500_bf_scaffold_4026_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9633..9992)
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI60_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69755.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10083..15122)
|
Alpha-2-macroglobulin domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LF24_RHITR
rbh
alpha-2-macroglobulin domain-containing protein
rbh
Alpha-2-macroglobulin domain-containing protein {ECO:0000313|EMBL:AGB69757.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15143..15733)
|
Alpha-2-macroglobulin domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LF24_RHITR
alpha-2-macroglobulin domain-containing protein
Alpha-2-macroglobulin domain-containing protein {ECO:0000313|EMBL:AGB69757.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_15
unknown
|
Not on your lists |
16116..17630
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_4026_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17881..18768)
|
Aldo-keto reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEE0_RHITR
rbh
aldo-keto reductase
rbh
Aldo-keto reductase {ECO:0000313|EMBL:AGB69758.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18899..19792
|
Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI39_RHITR
rbh
putative transcriptional regulator, LysR family
rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB69759.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19907..20521
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI65_RHITR
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB69760.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20514..20957)
|
Putative acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGD7_RHITR
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:AGB69761.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_500_bf_scaffold_4026_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20986..21936)
|
Putative oxidoreductase transmembrane protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V888_9RHIZ
rbh
Putative oxidoreductase transmembrane protein {ECO:0000313|EMBL:ENN89396.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative oxidoreductase
rbh
|