ggKbase home page

SCNpilot_expt_500_bf_scaffold_4207

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4207_1
unknown

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4207_2
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136..1062)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5S1_AGRVS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM40219.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_500_bf_scaffold_4207_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1125..2498)
DNA (1374bp) protein (458aa)
Sulfite reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSH3_RHITR rbh
sulfite reductase rbh
Sulfite reductase {ECO:0000313|EMBL:AGB74258.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4207_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2719..3180)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVT1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74259.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4207_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3592..4686
DNA (1095bp) protein (365aa)
Diguanylate cyclase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVV8_RHITR rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:AGB74260.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4207_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5187..6203
DNA (1017bp) protein (339aa)
Siderophore ABC transporter, periplasmic substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSQ3_RHITR rbh
siderophore ABC transporter, periplasmic substrate-binding protein rbh
Siderophore ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:AGB74262.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4207_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6207..7019
DNA (813bp) protein (271aa)
Siderophore ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSI1_RHITR rbh
siderophore ABC transporter, permease protein rbh
Siderophore ABC transporter, permease protein {ECO:0000313|EMBL:AGB74263.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4207_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7185..7949
DNA (765bp) protein (255aa)
Siderophore ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVT6_RHITR rbh
siderophore ABC transporter, ATP-binding protein rbh
Siderophore ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74264.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4207_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7954..8733
DNA (780bp) protein (260aa)
Ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-) rbh
SAM-dependent methyltransferase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036FB3D3 rbh
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:EHJ97398.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_expt_500_bf_scaffold_4207_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9844..10569
DNA (726bp) protein (242aa)
3-oxoacyl-(Acyl-carrier-protein) reductase protein n=2 Tax=Rhizobium etli RepID=S5S4Y4_RHIET rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KDP71308.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
oxidoreductase rbh
SCNpilot_expt_500_bf_scaffold_4207_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10662..11051
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZUT4_RHILW
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACI55643.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_500_bf_scaffold_4207_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11109..12236)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037F7354 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC75534.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09686 antibiotic transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_4207_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12233..13375)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035D7C34 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC75533.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09686 antibiotic transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_4207_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13372..14205)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003734AFF
ABC transporter related protein {ECO:0000313|EMBL:KFC75532.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
Displaying 14 items

View Taxonomy