ggKbase home page

SCNpilot_expt_500_bf_scaffold_4621

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4621_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412..1161)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UQY3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN84120.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
tryptophan 2 3-dioxygenase-like protein rbh
SCNpilot_expt_500_bf_scaffold_4621_2
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

1310..1780
DNA (471bp) protein (157aa)
Leucine-responsive regulatory protein, putative n=1 Tax=Ricinus communis RepID=B9TF53_RICCO
Leucine-responsive regulatory protein, putative
Leucine-responsive regulatory protein, putative {ECO:0000313|EMBL:EEF25512.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_expt_500_bf_scaffold_4621_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1829..2464)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family repressor n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UTJ3_9RHIZ rbh
Transcriptional regulator, TetR family repressor {ECO:0000313|EMBL:ENN84116.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator protein; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor rbh
SCNpilot_expt_500_bf_scaffold_4621_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2609..3835
DNA (1227bp) protein (409aa)
HlyD family secretion protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UQY1_9RHIZ rbh
HlyD family secretion protein {ECO:0000313|EMBL:ENN84115.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
mexE1; multidrug-efflux system secretion protein; K03585 membrane fusion protein rbh
SCNpilot_expt_500_bf_scaffold_4621_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3835..6435
DNA (2601bp) protein (867aa)
Acriflavin resistance protein HAE1 family Environmental Information Processing n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TUK1_9RHIZ rbh
Acriflavin resistance protein HAE1 family Environmental Information Processing {ECO:0000313|EMBL:ENN84114.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
mexF1; multidrug-efflux system; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_expt_500_bf_scaffold_4621_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6386..6922
DNA (537bp) protein (179aa)
Acriflavin resistance protein HAE1 family Environmental Information Processing n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TUK1_9RHIZ
Acriflavin resistance protein HAE1 family Environmental Information Processing {ECO:0000313|EMBL:ENN84114.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
mexF1; multidrug-efflux system; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_500_bf_scaffold_4621_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7012..7626)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ90_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB72891.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4621_8
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7947..8099
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DMF0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK84112.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_500_bf_scaffold_4621_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8119..8865)
DNA (747bp) protein (249aa)
Histidine utilization repressor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRZ0_RHITR rbh
hutC; histidine utilization repressor rbh
Histidine utilization repressor {ECO:0000313|EMBL:AGB72890.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4621_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8918..9835)
DNA (918bp) protein (306aa)
Formiminoglutamate deiminase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRV8_RHITR rbh
hutF; formiminoglutamate deiminase rbh
Formiminoglutamate deiminase {ECO:0000313|EMBL:AGB72889.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 10 items

View Taxonomy