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SCNpilot_expt_500_bf_scaffold_4893

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4893_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..150)
DNA (150bp) protein (50aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL72_RHITR
plsY; putative glycerol-3-phosphate acyltransferase PlsY
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici C
SCNpilot_expt_500_bf_scaffold_4893_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(185..1276)
DNA (1092bp) protein (364aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Dihydroorotase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJC7_RHITR rbh
pyrC; dihydroorotase, multifunctional complex type rbh
SCNpilot_expt_500_bf_scaffold_4893_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1418..2374)
DNA (957bp) protein (319aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Aspartate carbamoyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHV5_RHITR rbh
pyrB; aspartate carbamoyltransferase rbh
SCNpilot_expt_500_bf_scaffold_4893_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2559..4217
DNA (1659bp) protein (553aa)
Acyl-CoA dehydrogenase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHD3_RHITR rbh
Acyl-CoA dehydrogenase protein {ECO:0000313|EMBL:AGB70828.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
acyl-CoA dehydrogenase protein rbh
SCNpilot_expt_500_bf_scaffold_4893_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4221..4838
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWA9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN85975.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
acetyltransferase rbh
SCNpilot_expt_500_bf_scaffold_4893_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4942..5598
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJD3_RHITR rbh
transcriptional regulator, TetR family rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGB70831.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4893_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5898..6233
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDM6_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM26227.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_500_bf_scaffold_4893_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6167..6664)
DNA (498bp) protein (166aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Putative Holliday junction resolvase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHD6_RHITR
putative Holliday junction resolvase
SCNpilot_expt_500_bf_scaffold_4893_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7096..7578
DNA (483bp) protein (161aa)
UPF0173 metal-dependent hydrolase RTCIAT899_CH07155 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL48_RHITR
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase RTCIAT899_CH07155 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_4893_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7647..7934
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL81_RHITR
gatC; glutamyl-tRNA(Gln) amidotransferase, subunit C
SCNpilot_expt_500_bf_scaffold_4893_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7992..9473
DNA (1482bp) protein (494aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJD8_RHITR rbh
gatA; glutamyl-tRNA(Gln) amidotransferase, subunit A rbh
SCNpilot_expt_500_bf_scaffold_4893_12
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9494..9958
DNA (465bp) protein (155aa)
Acetyltransferase n=1 Tax=Rhizobium sp. CF122 RepID=J3BNA4_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:EJL54931.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
GCN5-related N-acetyltransferase protein
SCNpilot_expt_500_bf_scaffold_4893_13
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10037..11110)
DNA (1074bp) protein (358aa)
Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZX4_9DELT rbh
Phenylalanyl-tRNA synthetase subunit alpha {ECO:0000313|EMBL:EWS81718.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
phenylalanyl-tRNA synthetase subunit alpha rbh
SCNpilot_expt_500_bf_scaffold_4893_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11515..12897
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JDN1_AGRRK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM26232.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Displaying 14 items

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