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SCNpilot_expt_500_bf_scaffold_12020

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12020_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..156
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035EA85B
Uncharacterized protein {ECO:0000313|EMBL:EJC82956.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12020_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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618..827
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=2 Tax=Agrobacterium RepID=F0LF46_AGRSH
cold-shock protein
Cold shock protein {ECO:0000313|EMBL:EHJ95087.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_expt_500_bf_scaffold_12020_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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952..1176
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI00031225D4
Uncharacterized protein {ECO:0000313|EMBL:EJC75257.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12020_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1211..1591
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI0003712446
Uncharacterized protein {ECO:0000313|EMBL:EPE96668.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12020_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1686..1961
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KDV6_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC75259.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12020_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2102..2281
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI0002D34D7F
Signal transduction histidine kinase {ECO:0000313|EMBL:CDX60348.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_500_bf_scaffold_12020_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2390..2644
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEV5_RHIET
Type II toxin-antitoxin system antitoxin Phd/YefM family protein {ECO:0000313|EMBL:AIC31670.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
prevent-host-death family protein
SCNpilot_expt_500_bf_scaffold_12020_8
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2641..2877
DNA (237bp) protein (79aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Ribonuclease VapC n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JXR9_AGRVS
nucleic acid-binding protein contains PIN domain; K07062
Displaying 8 items

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