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SCNpilot_expt_500_bf_scaffold_12312

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12312_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..343)
DNA (342bp) protein (114aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EYR82234.1}; EC=1.14.11.33 {ECO:0000313|EMBL:EYR82234.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVR7_9RHIZ
alkylated DNA repair protein AlkB
SCNpilot_expt_500_bf_scaffold_12312_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(352..960)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMI3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84172.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12312_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1081..1722)
DNA (642bp) protein (214aa)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:EYR82233.1}; EC=3.2.2.21 {ECO:0000313|EMBL:EYR82233.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosylase II n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLL2_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_12312_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1846..2976)
DNA (1131bp) protein (377aa)
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:EYR82232.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EYR82232.1};; EC=2.1.1.n11 {ECO:0000313|EMBL:EYR82232.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AraC family transcriptional regulator; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] rbh
Bifunctional transcriptional activator/DNA repair enzyme Ada n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5U5_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_12312_5
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3060..3359)
DNA (300bp) protein (100aa)
cytidyltransferase-related; K00980 glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
Cytidyltransferase-related protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39G86_BURS3
Cytidyltransferase-related protein {ECO:0000313|EMBL:ABB08530.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
Displaying 5 items

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