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SCNpilot_expt_500_bf_scaffold_12822

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12822_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..392
DNA (390bp) protein (130aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
AttA1-like ABC transporter, ATP binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KR04_RHISN
attA2; AttA1-like ABC transporter ATP binding protein; K11080 mannopine transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_12822_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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491..1294
DNA (804bp) protein (268aa)
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6L5_RHIFR rbh
potB3; spermidine/putrescine transport system permease PotB rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:AFL51521.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_500_bf_scaffold_12822_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1284..2150
DNA (867bp) protein (289aa)
AttB-like ABC transporter, permease protein AttB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6L4_RHIFR rbh
attB; AttB-like ABC transporter, permease protein AttB rbh
AttB-like ABC transporter, permease protein AttB {ECO:0000313|EMBL:AFL51520.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_500_bf_scaffold_12822_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2198..2746
DNA (549bp) protein (183aa)
AttC protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AI23_RHIFH
attC; Spermidine/putrescine-binding periplasmic protein SPBP
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:CCF00705.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_500_bf_scaffold_12822_5
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2743..3246
DNA (504bp) protein (168aa)
ABC transporter,periplasmic solute-binding protein n=2 Tax=Rhizobium meliloti RepID=M4MFW0_RHIML
Spermidine/putrescine-binding periplasmic protein
ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:AAK65171.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_expt_500_bf_scaffold_12822_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3717..3968)
DNA (252bp) protein (84aa)
Probable plasmid stabilization protein n=2 Tax=Rhizobium etli RepID=B3Q493_RHIE6
putative plasmid stabilization protein
Putative toxin-antitoxin system toxin component {ECO:0000313|EMBL:GAJ97136.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_expt_500_bf_scaffold_12822_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4186..4401)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IJI3_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG70206.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
SCNpilot_expt_500_bf_scaffold_12822_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4556..5560)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=M4MFX0_RHIML rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAK65181.2}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
Displaying 8 items

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