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SCNpilot_expt_500_bf_scaffold_13386

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_13386_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(47..568)
DNA (522bp) protein (174aa)
dat; D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
D-alanine aminotransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U6K4_9RHIZ rbh
D-alanine aminotransferase {ECO:0000313|EMBL:ENN88229.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_13386_2
unknown

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738..929
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_13386_3
unknown

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961..1179
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_13386_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1196..1948)
DNA (753bp) protein (251aa)
aminopeptidase; K01266 D-aminopeptidase [EC:3.4.11.19]
Aminopeptidase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2X6_9RHIZ
Aminopeptidase {ECO:0000313|EMBL:ENN88230.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_13386_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2580..2957
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3S0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88510.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_13386_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3351..3656
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0H1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84607.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_13386_7
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3709..4503)
DNA (795bp) protein (265aa)
YdjC family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7X3_MESOW
YdjC family protein; K03478 hypothetical protein
YdjC family protein {ECO:0000313|EMBL:AEH86355.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_500_bf_scaffold_13386_8
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4454..5428)
DNA (975bp) protein (325aa)
sugar transferase n=1 Tax=Rhizobium loti RepID=UPI0003616BF4 rbh
Sugar transferase {ECO:0000313|EMBL:ESY67588.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
family 2 glycosyl transferase rbh
SCNpilot_expt_500_bf_scaffold_13386_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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5607..7055
DNA (1449bp) protein (483aa)
Putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVW2_POLGS
4-amino-4-deoxy-L-arabinose transferase
Putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family {ECO:0000313|EMBL:ADZ69219.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_500_bf_scaffold_13386_10
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7094..8404)
DNA (1311bp) protein (437aa)
ABC transporter nucleotide binding/ATPase protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K161_AGRVS rbh
ABC transporter ATPase; K02049 NitT/TauT family transport system ATP-binding protein rbh
ABC transporter nucleotide binding/ATPase protein {ECO:0000313|EMBL:ACM38609.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_500_bf_scaffold_13386_11
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8435..8752)
DNA (318bp) protein (106aa)
ABC-type anion transport system, duplicated permease component n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K162_AGRVS
ABC-type anion transport system, duplicated permease component; K02050 NitT/TauT family transport system permease protein
ABC-type anion transport system, duplicated permease component {ECO:0000313|EMBL:ACM38610.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
Displaying 11 items

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