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SCNpilot_expt_500_bf_scaffold_2110

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2110_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1026
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXK7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82974.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative methyl-accepting chemotaxis sensory transducer
SCNpilot_expt_500_bf_scaffold_2110_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1206..2156
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T4I4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EJJ26531.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
putative virK protein; K09824 hypothetical protein
SCNpilot_expt_500_bf_scaffold_2110_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2186..3418)
DNA (1233bp) protein (411aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX69_RHITR rbh
periplasmic sensor signal transduction histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_2110_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3415..4107)
DNA (693bp) protein (231aa)
Two-component transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYX4_RHITR rbh
two-component transcriptional regulator rbh
Two-component transcriptional regulator {ECO:0000313|EMBL:AGB75305.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2110_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4384..5076
DNA (693bp) protein (231aa)
NADH:ubiquinone oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYT4_RHITR rbh
NADH:ubiquinone oxidoreductase rbh
NADH:ubiquinone oxidoreductase {ECO:0000313|EMBL:AGB75304.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2110_6
unknown

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5334..5546
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2110_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5701..6330
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVI1_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB75303.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2110_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6405..7082)
DNA (678bp) protein (226aa)
UPI0003CDF398 related cluster n=1 Tax=unknown RepID=UPI0003CDF398
O-methyltransferase {ECO:0000313|EMBL:ESW74604.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
O-methyltransferase family protein rbh
SCNpilot_expt_500_bf_scaffold_2110_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7271..7615)
DNA (345bp) protein (115aa)
adenylate and Guanylate cyclase catalytic domain-containing protein; K01768 adenylate cyclase [EC:4.6.1.1]
Family 3 adenylate cyclase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQ34_9RHIZ
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJN02078.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCNpilot_expt_500_bf_scaffold_2110_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7712..8344
DNA (633bp) protein (211aa)
TetR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036AEBA3 rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS56796.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_500_bf_scaffold_2110_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8517..9704
DNA (1188bp) protein (396aa)
Major facilitator superfamily 1 protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVN3_RHITR rbh
major facilitator superfamily 1 protein rbh
Major facilitator superfamily 1 protein {ECO:0000313|EMBL:AGB75302.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 11 items

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