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SCNpilot_expt_500_bf_scaffold_2716

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2716_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..790
DNA (789bp) protein (263aa)
L-sulfolactate dehydrogenase {ECO:0000313|EMBL:KFC75116.1}; EC=1.1.1.272 {ECO:0000313|EMBL:KFC75116.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Malate/L-lactate dehydrogenase family protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I509_AZOC5
malate/L-lactate dehydrogenase family protein
SCNpilot_expt_500_bf_scaffold_2716_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1084..1932)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HGM3_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ95832.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2716_3
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2168..3145
DNA (978bp) protein (326aa)
Putative fatty acid desaturase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5C2E7_RHILU rbh
Putative fatty acid desaturase {ECO:0000313|EMBL:EKJ95722.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
Fatty acid desaturase rbh
SCNpilot_expt_500_bf_scaffold_2716_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3114..3914
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D176_RHILU rbh
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KAJ35576.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ABC-type phosphate/phosphonate transport system, periplasmic component rbh
SCNpilot_expt_500_bf_scaffold_2716_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3940..4191)
DNA (252bp) protein (84aa)
Phage late control gene D protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP00_RHITR
phage late control gene D protein
Phage late control gene D protein {ECO:0000313|EMBL:AGB71805.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2716_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4378..5106)
DNA (729bp) protein (243aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2DFR5_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK81627.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
transcriptional regulator protein rbh
SCNpilot_expt_500_bf_scaffold_2716_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5292..6278
DNA (987bp) protein (329aa)
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV61_RHITR rbh
ABC transporter, substrate-binding protein rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB75112.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2716_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6367..7146
DNA (780bp) protein (260aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV15_RHITR rbh
ABC transporter, ATP-binding protein rbh
Putative ATP-binding protein component of ABC transporter {ECO:0000313|EMBL:ENN85165.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_2716_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7151..8077
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY98_RHITR rbh
ABC transporter, permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AGB75114.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2716_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8099..9346
DNA (1248bp) protein (416aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Kynureninase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYE5_RHITR rbh
kynU; putative kynureninase rbh
SCNpilot_expt_500_bf_scaffold_2716_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9382..10212
DNA (831bp) protein (277aa)
Esterase/lipase/thiestherase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V229_9RHIZ rbh
Esterase/lipase/thiestherase protein {ECO:0000313|EMBL:ENN85162.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2716_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10277..10720)
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWP2_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENN85161.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_500_bf_scaffold_2716_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10830..12386)
DNA (1557bp) protein (519aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV20_RHITR rbh
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGB75118.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_2716_14
unknown

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12500..12853
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying 14 items

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