ggKbase home page

SCNpilot_expt_500_bf_scaffold_2727

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2727_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..285
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037CF289
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:GAN79034.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_2727_2
unknown

Not on your lists

comp(242..373)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2727_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

422..1090
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035CFF55 rbh
Putative transporter subunit: permease component of ABC superfamily transporter {ECO:0000313|EMBL:CDX19928.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
SCNpilot_expt_500_bf_scaffold_2727_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1077..1799
DNA (723bp) protein (241aa)
glnQ; glutamine ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036B584A rbh
Putative transporter subunit: ATP-binding component of ABC superfamily transporter {ECO:0000313|EMBL:CDX62296.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_500_bf_scaffold_2727_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1972..2406)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JSB0_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM35603.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_500_bf_scaffold_2727_6
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2703..4433)
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JCW0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EGL64214.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2727_7
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4430..4714)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JCV9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL64213.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
SCNpilot_expt_500_bf_scaffold_2727_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4889..8413)
DNA (3525bp) protein (1175aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SFC3_RHIET rbh
Uncharacterized protein {ECO:0000313|EMBL:AGS20882.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
hypothetical protein rbh
Displaying 8 items

View Taxonomy