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SCNpilot_expt_500_bf_scaffold_7650

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7650_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..672
DNA (672bp) protein (224aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
Glutamine ABC transporter, ATP-binding protein GlnQ n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A681_9PROT rbh
Glutamine ABC transporter, ATP-binding protein GlnQ {ECO:0000313|EMBL:EHL97238.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_expt_500_bf_scaffold_7650_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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720..1511
DNA (792bp) protein (264aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A682_9PROT rbh
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL97239.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
extracellular substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_7650_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1580..2593
DNA (1014bp) protein (338aa)
Putative alcohol dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWC4_RHITR rbh
putative alcohol dehydrogenase rbh
Putative alcohol dehydrogenase {ECO:0000313|EMBL:AGB74440.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7650_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2590..3357
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBU8_PARDP
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KKB82852.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_7650_5
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3382..4080
DNA (699bp) protein (233aa)
Demethylmenaquinone methyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2K4S3_9RHIZ rbh
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EUB98832.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
demethylmenaquinone methyltransferase rbh
SCNpilot_expt_500_bf_scaffold_7650_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4085..4417
DNA (333bp) protein (111aa)
UxaA family hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036EF6A9
Uncharacterized protein {ECO:0000313|EMBL:KKB82847.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_expt_500_bf_scaffold_7650_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4414..5607
DNA (1194bp) protein (398aa)
Galactarate dehydratase {ECO:0000313|EMBL:EUB98830.1}; EC=4.2.1.42 {ECO:0000313|EMBL:EUB98830.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Altronate hydrolase (EC:4.2.1.7)
Altronate dehydratase n=1 Tax=Rhizobium sp. CF080 RepID=J2TAN3_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_7650_8
unknown

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comp(5662..5835)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7650_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5935..6495
DNA (561bp) protein (187aa)
FMN reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUQ8_RHITR rbh
msuE; FMN reductase rbh
FMN reductase {ECO:0000313|EMBL:AGB74441.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7650_10
unknown

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6547..6717
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7650_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6782..6853
DNA (72bp) protein (24aa)
Uncharacterized protein {ECO:0000313|EMBL:AGB74442.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 11 items

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