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SCNpilot_expt_500_bf_scaffold_7661

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7661_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..591)
DNA (591bp) protein (197aa)
Putative polar amino acid ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXA9_RHITR rbh
putative polar amino acid ABC transporter, substrate-binding protein rbh
Putative polar amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB75346.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7661_2
unknown

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comp(1102..1350)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7661_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1548..2282
DNA (735bp) protein (245aa)
Putative LysR family transcriptional regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVN1_RHITR rbh
putative LysR family transcriptional regulator rbh
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:AGB75348.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7661_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2279..2470
DNA (192bp) protein (64aa)
Putative LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M7E4_RHIL3
LysR family transcriptional regulator
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:CAK10588.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_expt_500_bf_scaffold_7661_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2582..3922
DNA (1341bp) protein (447aa)
Putative nitrilotriacetate monooxygenase component A n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6W6_9RHIZ rbh
Putative nitrilotriacetate monooxygenase component A {ECO:0000313|EMBL:ENN86782.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
nitrilotriacetate monooxygenase component A rbh
SCNpilot_expt_500_bf_scaffold_7661_6
unknown

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comp(3984..4205)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7661_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4232..4438
DNA (207bp) protein (69aa)
Putative flavin reductase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U961_9RHIZ
Putative flavin reductase {ECO:0000313|EMBL:ENN86783.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
actinorhodin polyketide dimerase
SCNpilot_expt_500_bf_scaffold_7661_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4415..5578)
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXB6_RHITR rbh
aminotransferase class I and II rbh
Aminotransferase class I and II {ECO:0000313|EMBL:AGB75351.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7661_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5675..6730
DNA (1056bp) protein (352aa)
Putative agmatinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U2B6_9RHIZ rbh
Putative agmatinase {ECO:0000313|EMBL:ENN86784.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative agmatinase rbh
SCNpilot_expt_500_bf_scaffold_7661_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7070..8008
DNA (939bp) protein (313aa)
AgaE n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987J3_RHILO rbh
agaE protein, conversion of agropinic acid to mannopinic acid rbh
AgaE {ECO:0000313|EMBL:BAB53210.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_500_bf_scaffold_7661_11
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8335..8547
DNA (213bp) protein (71aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Phyllobacterium sp. YR531 RepID=J2W2I4_9RHIZ
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EJN06755.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
siderophore ABC transporter, periplasmic substrate-binding protein
SCNpilot_expt_500_bf_scaffold_7661_12
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8822..9574
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000371037B rbh
Membrane protein {ECO:0000313|EMBL:KGM27287.1}; TaxID=29488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus luminescens (Xenorhabdus luminescens).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7661_13
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9610..10131)
DNA (522bp) protein (174aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0VBD7_9RHIZ
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:EJZ16407.1}; Flags: Fragment;; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
putative ISL3 family transposase
Displaying 13 items

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