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SCNpilot_expt_500_bf_scaffold_7694

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7694_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..331
DNA (330bp) protein (110aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L0Q1_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJJ27022.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_7694_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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352..1302
DNA (951bp) protein (317aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1SP97_9RHIZ rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJJ27023.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter ATPase; K10439 ribose transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_7694_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1299..2108
DNA (810bp) protein (270aa)
ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC-type sugar transport system, ATPase component n=1 Tax=Rhizobium sp. CF142 RepID=J2L200_9RHIZ rbh
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EJJ27024.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_expt_500_bf_scaffold_7694_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2105..3109
DNA (1005bp) protein (335aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Rhizobium sp. CF142 RepID=J2AUH8_9RHIZ rbh
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EJJ27025.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
sugar ABC transporter permease; K02057 simple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_7694_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3109..4185
DNA (1077bp) protein (359aa)
Putative metal-dependent hydrolase with the TIM-barrel fold containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T5V8_9RHIZ rbh
Putative metal-dependent hydrolase with the TIM-barrel fold containing protein {ECO:0000313|EMBL:EJJ27026.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
resiniferatoxin-binding phosphotriesterase-related protein; K07048 phosphotriesterase-related protein rbh
SCNpilot_expt_500_bf_scaffold_7694_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4333..4953
DNA (621bp) protein (207aa)
Putative membrane protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L0Q5_9RHIZ rbh
Putative membrane protein {ECO:0000313|EMBL:EJJ27027.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7694_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4956..5858)
DNA (903bp) protein (301aa)
Sugar kinase, ribokinase n=1 Tax=Rhizobium sp. CF142 RepID=J1SPA1_9RHIZ rbh
Sugar kinase, ribokinase {ECO:0000313|EMBL:EJJ27028.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
PfkB domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_7694_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5885..6727
DNA (843bp) protein (281aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=Rhizobium sp. CF142 RepID=J2L202_9RHIZ rbh
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:EJJ27029.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein; K06971 rbh
SCNpilot_expt_500_bf_scaffold_7694_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6733..7377
DNA (645bp) protein (215aa)
Putative transcription activator n=1 Tax=Rhizobium sp. CF142 RepID=J2AUI0_9RHIZ rbh
Putative transcription activator {ECO:0000313|EMBL:EJJ27030.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
TenA family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_7694_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7468..8199)
DNA (732bp) protein (244aa)
Glutathione import ATP-binding protein gsiA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UER6_9RHIZ
Glutathione import ATP-binding protein gsiA {ECO:0000313|EMBL:ENN88663.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_7694_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8138..8782)
DNA (645bp) protein (215aa)
Glutathione import ATP-binding protein gsiA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UER6_9RHIZ
Glutathione import ATP-binding protein gsiA {ECO:0000313|EMBL:ENN88663.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Displaying 11 items

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