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SCNpilot_expt_500_bf_scaffold_7785

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7785_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..172)
DNA (171bp) protein (57aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Two-component sensor histidine kinase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKK6_AGRRK
feuQ; two-component sensor histidine kinase
SCNpilot_expt_500_bf_scaffold_7785_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(169..840)
DNA (672bp) protein (224aa)
Two-component system, regulatory protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVK6_RHITR rbh
two-component system, regulatory protein rbh
Two-component system, regulatory protein {ECO:0000313|EMBL:AGB74150.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_3
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(843..1160)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2LGR0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK86711.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7785_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1338..2402
DNA (1065bp) protein (355aa)
Non-ribosomal peptide synthetase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS82_RHITR
non-ribosomal peptide synthetase
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:AGB74148.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2396..5338
DNA (2943bp) protein (981aa)
Non-ribosomal peptide synthetase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS82_RHITR rbh
non-ribosomal peptide synthetase rbh
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:AGB74148.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5347..5958
DNA (612bp) protein (204aa)
Putative phosphopantetheinyltransferase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSE4_RHITR
putative phosphopantetheinyltransferase family protein
Putative phosphopantetheinyltransferase family protein {ECO:0000313|EMBL:AGB74147.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5989..6714)
DNA (726bp) protein (242aa)
Bkd operon transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRD3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EYR83866.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AsnC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_7785_8
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6970..8373)
DNA (1404bp) protein (468aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZ93_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY01413.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_expt_500_bf_scaffold_7785_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8459..8941
DNA (483bp) protein (161aa)
transketolase (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAY6_9RHIZ
Pyruvate dehydrogenase E1 component {ECO:0000313|EMBL:ENN89679.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_expt_500_bf_scaffold_7785_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8979..9926)
DNA (948bp) protein (316aa)
Putative bile acid/sodium symporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTX0_RHITR rbh
putative bile acid/sodium symporter rbh
Putative bile acid/sodium symporter {ECO:0000313|EMBL:AGB74146.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10253..10951
DNA (699bp) protein (233aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVK0_RHITR rbh
isoprenylcysteine carboxyl methyltransferase rbh
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:AGB74145.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11103..11915
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSE0_RHITR rbh
ABC transporter, ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74142.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_7785_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12920..13618
DNA (699bp) protein (233aa)
NMT1/THI5-like domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVJ5_RHITR rbh
NMT1/THI5-like domain-containing protein rbh
NMT1/THI5-like domain-containing protein {ECO:0000313|EMBL:AGB74140.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 13 items

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