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SCNpilot_expt_500_bf_scaffold_2381_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(12419..13219)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 264.0
  • Bit_score: 404
  • Evalue 1.10e-109
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 269.0
  • Bit_score: 361
  • Evalue 3.10e-97
  • rbh
Diaminopimelate epimerase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DQJ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 264.0
  • Bit_score: 404
  • Evalue 7.80e-110
  • rbh

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGTCATTTGGCTTTGAGAAAATGCATGCCAACGGAGACGACTTCGTCATTGTCGATTGCCGTGGAGAGCAGCCATTCATCAATGCCGGGATCGTCAGGCGCTTGGGCGATCGCAATCGCGGGGTCGGGTTCAATCAGCTCGCCGTCATGACCGATTGCGAGGATGCGGACGCTCGTCTCATGTTCTGGAATCCCGACGGCTCGACGCTGGATGCCTGCGGCAGCGCCACGCGCGGGGTGGCATGGAAGCTAATGCGAGAAATGCAGTCTTCGTGCGTGACCGTAAGAACCGAACGCGGACTTCTGACCTGCAAACAGGCGGAGGATGGCCTGATAGCGGTTGATATGGGCGACCCCCTTCTTCACTGGGCTGACGTCCCGCTTGCTCGTGAGGCGGACACTTTGAGACTGCCACTGGATGGCAGCCCGGCCGCTTGCAGCATGGGAAATCCGCATTGCACCCATTTTGTCGAGGACGCGGAAGCCGTTCAAATCGAGGCGCGAGGACCGGAAATCGAAAGGCATTCTCTCTTTCCAATGGGAACCAACGTGCATTTCGTGCAGGTGATCAATCCTGAGCGGATTCGGCTGCGAATATGGGAGCGCGGCGGTGGCATTTCGTCCGGCTCTGGATCCTGTGCCTGCGGCGCCGTGGTCAACGGCATTCGTCGCGGCCTGTTGCAAGATACCGTGGCGGTCGAATGCGACGGCGGCTCCTTGACGGTTACATGGAATGGTGCCGGCGGCGTATCGCTCAAGGGACCTGTCCAATCGGTTTTTCACGGTGTCTGGGAGGCGTGA
PROTEIN sequence
Length: 267
MSFGFEKMHANGDDFVIVDCRGEQPFINAGIVRRLGDRNRGVGFNQLAVMTDCEDADARLMFWNPDGSTLDACGSATRGVAWKLMREMQSSCVTVRTERGLLTCKQAEDGLIAVDMGDPLLHWADVPLAREADTLRLPLDGSPAACSMGNPHCTHFVEDAEAVQIEARGPEIERHSLFPMGTNVHFVQVINPERIRLRIWERGGGISSGSGSCACGAVVNGIRRGLLQDTVAVECDGGSLTVTWNGAGGVSLKGPVQSVFHGVWEA*