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SCNpilot_expt_500_bf_scaffold_8661_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 467..1369

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAW3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 291.0
  • Bit_score: 473
  • Evalue 1.50e-130
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ENN89654.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 291.0
  • Bit_score: 473
  • Evalue 2.20e-130
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 292.0
  • Bit_score: 450
  • Evalue 4.40e-124
  • rbh

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGACTGTTTCACTTGAGCAATTGGAGGCTTTCGTAACCGCCGTCGAAGCAGGCTCGTTTTCAGCCGCGGCCCGACACCTGCGCAAGGCGCAGTCGGCGGTAAGCTTGCTCGTCTCGACGCTGGAGGACGATCTCGGCGTTAAGCTCTTCAGCAGGGCGACAAGAAACCCGACATTAACAGCGGCGGGGCGACGGCTGCTGCCGGAGGCGAAGCTGCTTCTAGACCGCCGCGAACATCTGATCGGCATCGCAAGGAGCTTCGAGGAACATGTCGAGACGCGGCTTGTCGTTGCGATCGACGAACTGTATCCCGAGTCGTCGACCGGTGCGCTGTTTGCCGCCTTTGCCGATCGCTTCCCGCATGTCGAGCTGGAGCTGCGGTTTCCCCCGACCAAGGATGTCGTGGGGCTGGTTCTGGACGGCAAGGCCGATCTCGGCGTGATGTGGCGGCAAGAGAATCTCCCGCCCACGCTCGGCTTTCATACGATCGGCTGGGTTCCTCTCATCCTGGTCTGCGGCCGCAACCATCCTCTGGCACAGTTCCCCGTCACCTGGGAGGAGCTAAAACGTCATCGACAGATCATGGTGACGAAGCGGAGCGACGGCATGGAAACCCACCGTTTGCGCGTCGCCGCGGAAGTGTGGTGGGTTGAAAGCCATTGGGTCATTTTACAGATTCTGCAGCAGGGGATCGGATGGGCGCTGATCCCAGCCCACATTCTCGAAAACTCGCCGCTCGCCCCTAACCTGGCAACGCCGGTGCTGCAATTCGACGAAGGTGCGCATCCAGTCGCGCTCGAGCTTGTCTGGCACAAGCAACGCTCGTCAGGCCCGGCGGCAAAATGGCTTCGGGAGCAATTCGCGGCAAACGGGATACACTATCGAAAGCTCGGGAAAGTCTAG
PROTEIN sequence
Length: 301
MTVSLEQLEAFVTAVEAGSFSAAARHLRKAQSAVSLLVSTLEDDLGVKLFSRATRNPTLTAAGRRLLPEAKLLLDRREHLIGIARSFEEHVETRLVVAIDELYPESSTGALFAAFADRFPHVELELRFPPTKDVVGLVLDGKADLGVMWRQENLPPTLGFHTIGWVPLILVCGRNHPLAQFPVTWEELKRHRQIMVTKRSDGMETHRLRVAAEVWWVESHWVILQILQQGIGWALIPAHILENSPLAPNLATPVLQFDEGAHPVALELVWHKQRSSGPAAKWLREQFAANGIHYRKLGKV*