ggKbase home page

SCNpilot_expt_500_bf_scaffold_8661

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8661_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..382)
DNA (381bp) protein (127aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNZ8_9BRAD
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:ERF86131.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
transmembrane pair domain-containing protein
SCNpilot_expt_500_bf_scaffold_8661_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

467..1369
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAW3_9RHIZ rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ENN89654.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_8661_3
unknown

Not on your lists

2148..2312
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8661_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2863..3231
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JN09_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:GAJ92190.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8661_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3341..3868)
DNA (528bp) protein (176aa)
Putative acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0M029_RHITR
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:AGB75690.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_500_bf_scaffold_8661_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3919..4611)
DNA (693bp) protein (231aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] rbh
Glycerol-3-phosphate acyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQQ7_9BRAD rbh
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_expt_500_bf_scaffold_8661_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4740..5285)
DNA (546bp) protein (182aa)
Shikimate kinase n=1 Tax=Rhizobium sp. AP16 RepID=J2WW69_9RHIZ
AAA domain-containing protein {ECO:0000313|EMBL:AIC28126.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
hypothetical protein
Displaying 7 items

View Taxonomy