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SCNpilot_expt_500_bf_scaffold_1682

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1682_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..759
DNA (759bp) protein (253aa)
iron-containing alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase n=2 Tax=Labrenzia RepID=U7FN36_9RHOB
Alcohol dehydrogenase {ECO:0000313|EMBL:KFL32110.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_1682_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1109..1552
DNA (444bp) protein (148aa)
beta-lactamase class D; K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase class D n=1 Tax=Nitratireductor indicus C115 RepID=K2N5L4_9RHIZ
Beta-lactamase {ECO:0000313|EMBL:KFL32048.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_1682_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1549..1872)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J289_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:CDP51437.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1682_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2048..2593
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Q7_PELHB
Membrane protein {ECO:0000313|EMBL:KKB08130.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1682_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2597..3430)
DNA (834bp) protein (278aa)
SIS domain-containing protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BX93_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32115.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SIS domain-containing protein
SCNpilot_expt_500_bf_scaffold_1682_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3522..4283
DNA (762bp) protein (254aa)
N-formylglutamate amidohydrolase n=2 Tax=Labrenzia RepID=U7FLT6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB77071.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1682_7
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4323..4835
DNA (513bp) protein (171aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J1J4_9RHIZ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EMG52841.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
tripartite ATP-independent periplasmic transporter DctQ
SCNpilot_expt_500_bf_scaffold_1682_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4832..6157
DNA (1326bp) protein (442aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=3 Tax=Ochrobactrum RepID=C4WN44_9RHIZ rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:ELT48431.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
TRAP C4-dicarboxylate transport system permease DctM subunit rbh
SCNpilot_expt_500_bf_scaffold_1682_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6268..7329
DNA (1062bp) protein (354aa)
TRAP dicarboxylate transporter-DctP subunit n=2 Tax=Ochrobactrum RepID=M5JMY1_9RHIZ rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ELT48430.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
TRAP dicarboxylate transporter-DctP subunit rbh
SCNpilot_expt_500_bf_scaffold_1682_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7412..8773
DNA (1362bp) protein (454aa)
glnA4; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase n=2 Tax=Agrobacterium RepID=F0L8B0_AGRSH
Glutamine synthetase {ECO:0000313|EMBL:KFL32112.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_1682_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8770..9831)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003779C79 rbh
Alanine racemase {ECO:0000313|EMBL:KKB77771.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
alanine racemase domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_1682_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9828..10607)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CBG9_9RHIZ rbh
Catenin {ECO:0000313|EMBL:KFL32129.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_1682_13
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10635..11018)
DNA (384bp) protein (128aa)
TdcF n=2 Tax=Labrenzia RepID=U7GNF3_9RHOB
Endoribonuclease L-PSP {ECO:0000313|EMBL:KKB77895.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
YigF family translation initiation factor
SCNpilot_expt_500_bf_scaffold_1682_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11153..12292
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037D5A63 rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
microcystin LR degradation protein rbh
SCNpilot_expt_500_bf_scaffold_1682_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12307..12621
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003800B08
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1682_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12762..14771)
DNA (2010bp) protein (670aa)
beta-N-acetylhexosaminidase protein (EC:3.2.1.52) rbh
N-acetyl-beta-hexosaminidase n=1 Tax=Rhizobium sp. CF142 RepID=J2ASW8_9RHIZ rbh
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:KKB08128.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_1682_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14925..15791)
DNA (867bp) protein (289aa)
RpiR family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI000363EAC5
Uncharacterized protein {ECO:0000313|EMBL:KKB08127.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
RpiR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1682_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15821..16897)
DNA (1077bp) protein (359aa)
malK; ABC transporter nucleotide binding/ATPase (maltose/maltodextrin); K10111 maltose/maltodextrin transport system ATP-binding protein [EC:3.6.3.19] rbh
sugar ABC transporter ATP-binding protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558619 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB08126.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_1682_19
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16976..18196)
DNA (1221bp) protein (407aa)
ABC transporter substrate-binding protein n=2 Tax=Rhizobium leguminosarum RepID=UPI00036C2CC6
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32135.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar uptake ABC transporter, substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_1682_20
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18325..19260)
DNA (936bp) protein (312aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J2T9_9RHIZ rbh
Sugar ABC transporter, permease protein, ThuG {ECO:0000313|EMBL:KFC70665.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
sugar uptake ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_1682_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19257..20144)
DNA (888bp) protein (296aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B6G4_RHILS rbh
ABC transporter permease {ECO:0000313|EMBL:KKB08125.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sugar uptake ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_1682_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20158..21312)
DNA (1155bp) protein (385aa)
Putative dehydrogenase n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q732_9RHIZ rbh
Oxidoreductase {ECO:0000313|EMBL:KKB08124.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_1682_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21682..22176
DNA (495bp) protein (165aa)
UPI0003CF36C3 related cluster n=1 Tax=unknown RepID=UPI0003CF36C3
Uncharacterized protein {ECO:0000313|EMBL:KKB08384.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1682_24
unknown

Not on your lists

comp(22614..22829)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1682_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23301..23516
DNA (216bp) protein (72aa)
Major facilitator superfamily protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q3C6_9RHIZ
Membrane protein {ECO:0000313|EMBL:KKB08123.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_1682_26
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23532..24962
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIZ1_AGRRK
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1682_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25042..25815
DNA (774bp) protein (258aa)
Transcriptional regulator, DeoR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UDK2_SINMW rbh
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KKB08121.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor rbh
SCNpilot_expt_500_bf_scaffold_1682_28
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25812..26912)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376A932 rbh
Peptidase M24 {ECO:0000313|EMBL:KKB83023.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
peptidase M24 rbh
SCNpilot_expt_500_bf_scaffold_1682_29
unknown

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comp(26953..27210)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1682_30
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27210..30536)
DNA (3327bp) protein (1109aa)
Pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KKC39742.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KKC39742.1};; EC=1.5.5.2 {ECO:0000313|EMBL:KKC39742.1};; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
putA; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] rbh
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9S3R9_9RHOB rbh
Displaying items 1-30 of 31 in total

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