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SCNpilot_expt_500_bf_scaffold_6588

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6588_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1095)
DNA (1095bp) protein (365aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dnaE2; error-prone DNA polymerase (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
DNA polymerase n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036990CD
SCNpilot_expt_500_bf_scaffold_6588_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1138..2559)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BA4AF
Uncharacterized protein {ECO:0000313|EMBL:KKB08304.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein; K14161 protein ImuB
SCNpilot_expt_500_bf_scaffold_6588_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2612..3274)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IL06_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KFC68595.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein; K14160 protein ImuA
SCNpilot_expt_500_bf_scaffold_6588_4
unknown

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comp(3540..3938)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6588_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4693..5142
DNA (450bp) protein (150aa)
Universal stress protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7P0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30174.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
UspA protein
SCNpilot_expt_500_bf_scaffold_6588_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5254..5784
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] rbh
Inorganic pyrophosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6W6_PELHB rbh
SCNpilot_expt_500_bf_scaffold_6588_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5944..6492)
DNA (549bp) protein (183aa)
50S ribosomal protein L19 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Z5_PELHB
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
SCNpilot_expt_500_bf_scaffold_6588_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6799..7491)
DNA (693bp) protein (231aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
tRNA (Guanine37-N1) -methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Z6_PELHB
SCNpilot_expt_500_bf_scaffold_6588_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7488..8027)
DNA (540bp) protein (180aa)
Ribosome maturation factor RimM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Z7_PELHB
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
SCNpilot_expt_500_bf_scaffold_6588_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8086..8697)
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB13784.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Displaying 10 items

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