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SCNpilot_expt_500_bf_scaffold_9573

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9573_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..230
DNA (228bp) protein (76aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQG9_9SPHN
SCNpilot_expt_500_bf_scaffold_9573_2
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(335..646)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WPG6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKC35065.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9573_3
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(643..3141)
DNA (2499bp) protein (833aa)
cytochrome c oxidase polypeptide I; K15408 cytochrome c oxidase subunit I+III [EC:1.9.3.1] rbh
Cytochrome c oxidase polypeptide I n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCT5_PELHB rbh
Cytochrome B561 {ECO:0000313|EMBL:KKC35064.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
SCNpilot_expt_500_bf_scaffold_9573_4
unknown

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3765..4007
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9573_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4004..4558
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000366D38D
Membrane protein {ECO:0000313|EMBL:KKC35160.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9573_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4539..5039)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCT3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10159.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9573_7
unknown

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5182..6009
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9573_8
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5915..8410)
DNA (2496bp) protein (832aa)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein {ECO:0000313|EMBL:AEM40065.1}; EC=1.1.5.2 {ECO:0000313|EMBL:AEM40065.1};; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
gcd; Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] rbh
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y909_KETVW rbh
SCNpilot_expt_500_bf_scaffold_9573_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8849..9142
DNA (294bp) protein (98aa)
Glutaredoxin protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K595_AGRVS
Glutaredoxin {ECO:0000313|EMBL:KKB75951.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
nrdH; glutaredoxin protein
SCNpilot_expt_500_bf_scaffold_9573_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9150..9548
DNA (399bp) protein (133aa)
Protein NrdI n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FBT9_9RHIZ
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
nrdI; protein that stimulates ribonucleotide reduction
SCNpilot_expt_500_bf_scaffold_9573_11
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9536..10894
DNA (1359bp) protein (453aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Rhizobium sp. AP16 RepID=J2WAT8_9RHIZ
Displaying 11 items

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